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Columbia Basin Fish and Wildlife Program Columbia Basin Fish and Wildlife Program
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Contract Number:
Contract Title:
2003-017-00 EXP ISEMP - USFWS ENTIAT R FISHERIES EFFECT. M&E 2015
Contract Start Date:
2/1/2015
Contract End Date:
1/31/2016
Title:
F: 157 - Operate and maintain PIT tag detection arrays on Entiat and Mad Rivers
Description:
The USFWS is responsible for the operation and maintenance of 6 PIT tag detection arrays located on the mainstem Entiat River and Mad River and up to 6 on side channels. These arrays provide passive recapture data used to provide survival and movement data from PIT tagged juvenile fish residing and moving around the Entiat and Mad Rivers.
Routine operation and maintenance requirements

The USFWS will be responsible for visiting sites at least once per week, or if necessary on a more frequent schedule during times of increased fish activity. Arrays with high rates of tag detection will need to be visited on a more frequent basis to avoid losing large amounts of data in the event of equipment malfunction. If the USFWS knows in advance that it will be unable to visit a site at the scheduled time, it will contact the Upper Columbia ISEMP coordinator as soon as possible so that alternative arrangements can be made. If the USFWS was unable to visit a site on the scheduled day it should make the visit the following day, or if that is not possible, contact the Upper Columbia ISEMP coordinator immediately so that other arrangements can be made.

For the off-channel study the number of antennas required will be dependent upon the size and specific characteristics of each site. For example, off-channel habitats that reconnect to the main-channel river may require two antennas, while habitats that do not reconnect may only require one antenna. Reconnecting sites may also require two separate power supplies depending upon the distance between antenna locations. Antennas constructed to operate with an Allflex transceiver and data-logger would be suitable for this project. We assume that most sites will not have access to grid AC power and will require additional batteries available for weekly replacement.

Once at the site the USFWS is responsible for the following tasks:

Project: Operation and Maintenance of 6 Mainstem Antenna Arrays
Task: Respond to alarms/notifications generated from QCI. Follow up with site visit to troubleshoot as necessary.
Frequency: Daily or as needed
Notes: At times requires logging into QCI server to check reports and troubleshoot likely causes (i.e. antenna unplugged or low voltage due to switcher/timer). Usually necessary about twice a week. Contact QCI staff as necessary to turn alarms on or off. Alarm system has a tendency at times to generate a high number of 'false' alarms which can distract from those that require action.
Task: Site visits to conduct routine maintenance.
Frequency: Weekly
Notes: Visual inspection of antennas. Removal of debris as necessary. Cycle through transceiver settings and document errors. Record site conditions in log book for reporting to PTAGIS (Site Event Logs). Troubleshoot malfunctions and fix as necessary and able (i.e. reconnect cables, restart mux, verify battery voltage, etc.)
Task: Site visits to conduct routine maintenance.
Frequency: Quarterly as flow allows
Notes: Inspect NRS strapping on each anchor for wear and replace as needed. Inspect communication cords and connection points. Replace zip ties at each connection point (hydravolt connectors). Tune each individual antenna. Inspect batteries and other equipment in power supply/transceiver box. Notify NOAA Electronic Technican if repair or equipment is needed. Submit site event logs to PTAGIS.
Task: Site visits to conduct routine maintenance.
Frequency: Annually
Notes: Replacement of all NRS straps in early spring prior to high flows.
Task: Scheduling repairs/assistance beyond scope of USFWS contract.
Frequency: As needed
Notes: NOAA Electronic Technician is contacted when equipment failure is experienced beyond the scope of USFWS routine maintenance, such as antenna replacement, transceiver software troubleshooting, updating firmware, communication failures and fixing power supply failures.
Project: Operation and Maintenance of up to 6 off-channel monitoring locations.
Task: Data Management
Frequency: Daily or as needed
Notes :Reformat data files for submission to PTAGIS (Allflex file type). Upload files to PTAGIS and load data to USFWS Database for additional redundancy.
Task: Data Management
Frequency: Annually as needed
Notes: Identify and notify Upper Columbia ISEMP coordinator of upcoming equipment needs based on inclusion of new sites. New site installation. Submission of site listing requests to PTAGIS. FWS submits purchase requests to UC ISEMP coordinator for materials needed.
Task: Site visits to conduct routine maintenance
Frequency: Weekly
Notes: Check voltage at each site (multiple power sources per site) and replace batteries or troubleshoot solar power. Download data from memory card and save to laptop. Download temperature loggers. Inspect antennas and equipment for damage. Remove debris as necessary. Fix or replace broken equipment, retune antennas as necessary. Record maintenance activities within site log.
Task: Site visits to conduct routine maintenance
Frequency: Quarterly
Notes: Inspect/reposition antennas as wetted width changes. Fix or replace broken equipment such as strapping, old batteries, etc. Upload site event logs to PTAGIS. Check and retune antennas.

A laptop configured with, at the minimum, Windows XP Operating System and Office 2003, and the P3 program from PTAGIS website (www.pittag.org) should be used for downloading data in the field. Data will be downloaded using MiniMon on laptop during a site visit, or remotely via cell phone or satellite, depending upon the location of the array.
WE Agreement Type:
Contracted
Deliverable Specification:
Quality controlled raw data and quality controlled summarized data will be entered and stored in a Microsoft Access database or Excel spreadsheets and uploaded to PTAGIS on a weekly basis. A complete QAQC'd database will be provided to the Upper Columbia ISEMP Coordinator by December 31 2015. Notice will be provided to BPA and Terraqua, Inc. when the data has been uploaded. The contractor will be responsible for all quality assurance/quality control steps necessary to ensure that data is properly collected and entered.
WSE Effective Budget:
$48,441
% of Total WSE Effective Budget:
11.71%
WSE Start:
02/01/2015
WSE End:
01/31/2016
WSE Completion:
WSE Progress:
Canceled
WSE ID Continued From:
n/a
WSE ID Continued To:
n/a
Finite or Recurring:
Recurring

SOWRevision Planned Updated Contractor Comments (optional) BPA Comments (optional)
1. 67971 (02/01/2015 - 01/31/2016) $57,892 $48,441 reduced by $9,451 as part of de-obligation process to address Entiat IMW staffing needs
Work Element Budget (Current Performance Period) $48,441 $48,441 reduced by $9,451 as part of de-obligation process to address Entiat IMW staffing needs

6 Milestones
Sort Type Title Start End Status Modified By Modified Date
A EC Environmental compliance requirements complete 2/1/2015 2/28/2015 Concluded David Byrnes (Inactive) 4/7/2015 1:07:40 PM
Description: On-the-ground work associated with this work element cannot proceed until this milestone is complete. Milestone is complete when final documentation is received from BPA environmental compliance staff (completion can be based on pre-existing environmental documentation from BPA).
B PUBPROTOCOL Review, revise, and Publish protocol, study design, and methods in monitoringmethods.org 2/1/2015 6/30/2015 Canceled David Byrnes (Inactive) 4/7/2015 1:07:40 PM
Description: The Protocol (including temporal and spatial design) and Methods for this work element are stored at monitoringmethods.org and need to be finalized (i.e., "Published" through monitoringmethods.org), preferably prior to data collection. Preparations for contract renewals must include reviewing any previously published Protocols/Methods to ensure that they are consistent with how work will be done in any subsequent contract.
C BackUp Secure data back-up 2/1/2015 1/31/2016 Canceled David Byrnes (Inactive) 4/7/2015 1:07:40 PM
Description: Minimum requirements: Hard copies of field sheets and original dataloggers secured against fire and flood. At least daily data back-up of electronic data on a separate hard drive. Secure cloud-based or off-site location data back-up to preclude catastrophic data loss at least weekly. More frequent cloud/off-site back-up is greatly encouraged. [Timing guidance: from beginning to end of contract]
D Upload Yearly upload of error-checked datasets 2/1/2015 1/31/2016 Canceled David Byrnes (Inactive) 4/7/2015 1:07:40 PM
Description: Upload datasets with associated metadata to a publicly accessible site each year as soon as they have been QA/QC checked. This generally happens within 6 months for direct field-to-database input, but may be longer if laboratory analysis is required (e.g., scale reading or genetic analyses). If data is not QA/QCed within 1 year, data must be made accessible with acknowledgement of QA/QC limitations. Periods for dataset collection should be no longer than a year, and coincide with the logical biology of the data collection, which may not be on a calendar year. Example of a dataset: redd counts for one species for one season for a particular brood year. Dataset upload requirements apply to both original and derived data, which should be at a level of quality suitable for release to resource co-managers to make decisions – not the rigor required as if you were going to use the data for a peer-reviewed publication.
E Operate and maintain mainstem and side channel PIT tag detection arrays 2/1/2015 1/31/2016 Canceled David Byrnes (Inactive) 4/7/2015 1:07:40 PM
Description: Project: Operation and Maintenance of 6 Mainstem Antenna Arrays Task: Respond to alarms/notifications generated from QCI. Follow up with site visit to troubleshoot as necessary. Frequency: Daily or as needed Task: Site visits to conduct routine maintenance. Frequency: Weekly Task: Site visits to conduct routine maintenance. Frequency: Quarterly as flow allows Task: Site visits to conduct routine maintenance. Frequency: Annually Task: Scheduling repairs/assistance beyond scope of USFWS contract. Frequency: As needed Project: Operation and Maintenance of up to 6 off-channel monitoring locations. Task: Data Management Frequency: Daily or as needed Task: Data Management Frequency: Annually as needed Task: Site visits to conduct routine maintenance Frequency: Weekly Task: Site visits to conduct routine maintenance Frequency: Quarterly
F DELIV Data from instream PIT tag detection arrays 12/31/2015 Canceled David Byrnes (Inactive) 4/7/2015 1:07:40 PM
Description: Quality controlled raw data and quality controlled summarized data will be entered and stored in a Microsoft Access database or Excel spreadsheets and uploaded to PTAGIS on a weekly basis. A complete QAQC'd database will be provided to the Upper Columbia ISEMP Coordinator by December 31 2015. Notice will be provided to BPA and Terraqua, Inc. when the data has been uploaded. The contractor will be responsible for all quality assurance/quality control steps necessary to ensure that data is properly collected and entered.

Work Site ID Latitude Longitude State County Province Subbasin
27145 47.736851 -120.368739 Washington Chelan Columbia Cascade Entiat
27146 47.858187 -120.422233 Washington Chelan Columbia Cascade Entiat
27147 47.7387 -120.362519 Washington Chelan Columbia Cascade Entiat
27148 47.663782 -120.24282 Washington Chelan Columbia Cascade Entiat
27149 47.797049 -120.403073 Washington Chelan Columbia Cascade Entiat
27153 47.897486 -120.462012 Washington Chelan Columbia Cascade Entiat

Primary Focal Species:
Chinook (O. tshawytscha) - Upper Columbia River Spring ESU (Endangered); Steelhead (O. mykiss) - Upper Columbia River DPS (Threatened)
Secondary Focal Species:
None

Title Link
PTAGIS Website http://www.ptagis.org/
Study Plan Name Study Plan Owner Protocol State Sample Design Name
Entiat Intensively Monitored Watershed (2003-017-00) v1.0 v1.0 Carol Volk Draft Operate and maintain PIT tag detection arrays on Entiat and Mad Rivers - US Fish and Wildlife Service (USFWS) v1.0

ID Name Type Optional Customized Based On Status
188 Electro Fishing v1.0 Data Collection No N/A Draft
189 Electro Fishing-Survey Event v1.0 Data Collection No N/A Expired
201 Fish Capture-Angling v1.0 Data Collection No N/A Finalized
202 Fish Capture-Dip Net Supplement to Snorkel v1.0 Data Collection No N/A Finalized
203 Fish Capture-Electro Herding v1.0 Data Collection No N/A Draft
204 Fish Capture-Seining v1.0 Data Collection No N/A Finalized
205 Fish Capture-Snorkel Herding v1.0 Data Collection No N/A Finalized
206 Fish Capture-Survey Event v1.0 Data Collection No N/A Expired
746 Growth Rate for Individual Fish v1.0 Data Analysis/Interpretation No N/A Finalized
214 Habitat-Channel Cross Sections v1.0 Data Collection No N/A Revising
215 Habitat-Channel Transects v1.0 Data Collection No N/A Revising
217 Habitat-Fish Cover v1.0 Data Collection No N/A Finalized
219 Habitat-Large Woody Debris Assessment v1.0 Data Collection No N/A Revising
220 Habitat-Longitudinal Profile-Habitat Units v1.0 Data Collection No N/A Finalized
222 Habitat-Pool Sampling v1.0 Data Collection No N/A Revising
223 Habitat-Riparian Assessment-Canopy, Understory and Groundcover Aerial Estimates v1.0 Data Collection No N/A Finalized
226 Habitat-Site Lay Out v1.0 Data Collection No N/A Revising
228 Habitat-Survey Event v1.0 Data Collection No N/A Expired
234 Macroinvertebrates-Benthic Field Collection v1.0 Data Collection No N/A Finalized
235 Macroinvertebrates-Drift Field Sampling v1.0 Data Collection No N/A Finalized
236 Macroinvertebrates-Survey Event v1.0 Data Collection No N/A Expired
322 Riparian Planting-Survey Event v1.0 Data Collection No N/A Revising
271 Rotary Screw Trap-Efficiency Trial v1.0 Data Collection No N/A Finalized
272 Rotary Screw Trap-Fish Count By Species Group v1.0 Data Collection No N/A Finalized
273 Rotary Screw Trap-Individual Fish Measurements v1.0 Data Collection No N/A Revising
279 Site Establishment-Monumented Site v1.0 Data Collection No N/A Finalized
281 Snorkel within Habitat Units v1.0 Data Collection No N/A Archived
282 Snorkeling v1.0 Data Collection No N/A Expired
286 Spawning Survey-Spawners v1.0 Data Collection No N/A Finalized
287 Spawning Survey-Survey Event v1.0 Data Collection No N/A Finalized
326 Survey Event-Snorkel Observation v1.0 Data Collection No N/A Expired
315 Water Quality-Survey Event v1.0 Data Collection No N/A Expired

Title Category Subcategory Subcategory focus 1 Subcategory focus 2
Classification of Ecological or Geological Attribute Form/Morphology (ID: 31) Habitat Type: Multiple NA
Classification of Ecological or Geological Attribute Habitat Quality (ID: 33) Habitat Type: Multiple NA
Classification of Ecological or Geological Attribute Land Ownership (ID: 34) NA NA
Classification of Ecological or Geological Attribute Land Use (ID: 35) NA NA
Classification of Ecological or Geological Attribute Habitat Type (ID: 192) NA NA
Fish Abundance of Fish (ID: 46) Fish Life Stage: Juvenile - Parr Fish Origin: Natural
Fish Abundance of Fish (ID: 46) Fish Life Stage: Juvenile - Migrant Fish Origin: Natural
Fish Abundance of Fish (ID: 46) Fish Life Stage: Adult - Returner Fish Origin: Both
Fish Abundance of Fish (ID: 46) Fish Life Stage: Adult - Spawner Fish Origin: Both
Fish Abundance of Fish (ID: 46) Fish Life Stage: Adult - Carcass Fish Origin: Both
Fish Age: Fish (ID: 48) Fish Life Stage: Juvenile Fish Fish Origin: Natural
Fish Age: Fish (ID: 48) Fish Life Stage: Adult Fish Fish Origin: Natural
Fish Carrying Capacity: Fish (ID: 51) NA NA
Fish Composition: Fish Species Assemblage (ID: 56) Fish Life Stage: Juvenile Fish Fish Origin: Both
Fish Condition of Life Stage: Fish (ID: 57) Fish Life Stage: Juvenile Fish NA
Fish Density of Fish Species (ID: 59) Fish Life Stage: Juvenile Fish NA
Fish Distribution of Fish Species (ID: 62) Fish Life Stage: Juvenile Fish NA
Fish Diversity of Fish: Change (ID: 64) Fish Life Stage: Juvenile Fish NA
Fish Diversity of Fish: Change (ID: 64) Fish Life Stage: Adult Fish NA
Fish Growth Rate: Fish (ID: 73) Fish Life Stage: Juvenile Fish NA
Fish Length: Fish Species (ID: 75) Fish Life Stage: Juvenile Fish NA
Fish Length: Fish Species (ID: 75) Fish Life Stage: Adult Fish NA
Fish Mortality: Fish (ID: 78) Fish Life Stage: Juvenile Fish NA
Fish Progeny-per-Parent Ratio (P:P) (Productivity) (ID: 86) Fish Life Stage: RANGE: Adult to Juvenile NA
Fish Sex Ratio: Fish (ID: 92) Fish Life Stage: RANGE: Adult to Adult Fish Origin: Both
Fish Stray Rate (ID: 96) Fish Origin: Both NA
Fish Survival: Fish (ID: 97) Fish Life Stage: RANGE: Adult to Juvenile Fish Origin: Both
Fish Timing of Life Stage: Fish (ID: 101) Fish Life Stage: Juvenile - Migrant NA
Fish Mark/Tag Application (ID: 201) NA NA
Fish Origin (ID: 202) NA NA
Fish Scales (ID: 203) NA NA
Fish Weight: Fish (ID: 206) NA NA
Fish Timing of Life Stage: Fish (ID: 101) Fish Life Stage: Juvenile Fish NA
Fish Survival: Fish (ID: 97) Fish Life Stage: Juvenile Fish Fish Origin: Both
Fish Weight: Fish (ID: 206) Fish Life Stage: Juvenile Fish NA
Fish Mark/Tag Recovery or Detection (ID: 381) NA NA
TBD Fish Spawning/Nesting (ID: 507) Fish Origin: Natural NA
Landscape Form & Geomorphology Abundance of Habitat Types (ID: 15) NA NA
Landscape Form & Geomorphology Depth: Bathymetry (ID: 17) NA NA
Landscape Form & Geomorphology Cover (ID: 20) Habitat Type: Overhanging Vegetation NA
Landscape Form & Geomorphology Cover (ID: 20) Habitat Type: Terrestrial Vegetation Zones NA
Landscape Form & Geomorphology Density of Habitat Type (ID: 21) Habitat Type: Multiple NA
Landscape Form & Geomorphology Distance Between Habitat Types (ID: 23) Habitat Type: Multiple NA
Landscape Form & Geomorphology Distribution of Barriers (ID: 24) NA NA
Landscape Form & Geomorphology Distribution of Instream Wood (ID: 25) NA NA
Landscape Form & Geomorphology Edge/Density/Sinuosity (ID: 29) NA NA
Landscape Form & Geomorphology Elevation (ID: 30) NA NA
Landscape Form & Geomorphology Gradient (ID: 32) NA NA
Landscape Form & Geomorphology Length/Width/Area (ID: 36) Habitat Type: Multiple NA
Landscape Form & Geomorphology Depth: Pool (ID: 37) NA NA
Landscape Form & Geomorphology Species Cover (ID: 39) Habitat Type: Multiple NA
Landscape Form & Geomorphology Width to Depth Ratio (ID: 43) NA NA
Landscape Form & Geomorphology Width: Bankfull (ID: 44) NA NA
Landscape Form & Geomorphology Width: Wetted (ID: 45) NA NA
Landscape Form & Geomorphology Depth/Height: Bankfull (ID: 188) NA NA
Landscape Form & Geomorphology Water Surface Elevation (ID: 198) NA NA
tbd Landscape Form & Geomorphology Distribution of Habitat Type (ID: 440) Habitat Type: Channel: Pools NA
tbd Landscape Form & Geomorphology Aquatic or Floodplain Geomorphology: Area (ID: 369) Habitat Type: Channel: Pools NA
tbd Landscape Form & Geomorphology Density of Barriers (ID: 373) NA NA
tbd Landscape Form & Geomorphology Density of Instream Wood (ID: 374) NA NA
Macroinvertebrates Abundance of Macroinvertebrates (ID: 112) NA NA
Macroinvertebrates Composition: Macroinvertebrate Species Assemblage (ID: 113) NA NA
Sediment/Substrate/Soils Depth-Fines (ID: 134) NA NA
tbd Sediment/Substrate/Soils Composition: Substrate/Soil-Dominant Type (ID: 133) NA NA
Time Time: Actual (ID: 120) NA NA
Time Time: Duration (ID: 121) NA NA
Water Quality Conductivity (ID: 154) NA NA
Water Quality Water Temperature (ID: 162) NA NA