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Columbia Basin Fish and Wildlife Program Columbia Basin Fish and Wildlife Program
Select a work element:
Contract Number:
Contract Title:
2003-017-00 EXP ISEMP -USFWS ENTIAT R FISHERIES EFFECT. M&E 2014
Contract Start Date:
2/1/2014
Contract End Date:
1/31/2015
Title:
I: 157 - Conduct mainstem off-channel effectiveness monitoring as part of Entiat IMW
Description:
The USFWS MCRFRO will conduct seasonal quantitative biological evaluations of existing and proposed off-channel habitats within the Entiat River. The proposed actions conform to the habitat implementation strategy and study objectives outlined within the Entiat River IMW study design. This study will monitor fish use in off-channel habitat as defined as watered aquatic habitat outside of the main channel. USFWS will use a suite of tools consisting of seasonal mark-recapture events using PIT tags and PIT tag interrogation sites. This fish monitoring will be supported by habitat and potentially macroinvertebrate monitoring carried out by Terraqua under a separate contract. The mark-recapture sampling, focused on juvenile steelhead and Chinook salmon, will be conducted within a time frame similar to main-channel mark-recapture sampling periods (winter and summer) with the addition of a fall sampling period as needed at selected sites. In addition, the use of instream PIT tag detection antennas will generate survival and movement data.

This sampling design will produce sufficient data to determine species composition, abundance, and site use patterns. Estimates of steelhead age composition, growth, and survival estimates will be dependent upon sufficient numbers of fish captured and PIT tagged during seasonal mark-recapture events. We anticipate high capture efficiencies during sampling periods based on previous experience and the ability to utilize block netting within off-channel sites. Ultimately, the likelihood of obtaining age, growth, and survival estimates will be dependent upon the number of fish utilizing these specific habitats. We will further investigate the potential use of mobile wand antennas to increase resighting occasions if proven necessary.

At newly constructed habitat, the time frame for basic biological responses is expected to be short (seasonal); however, longer monitoring periods will be required to evaluate a biological response over time (annual). The long-term performance of off-channel habitats is an important monitoring consideration as natural processes may alter biological benefits over time. Off-channel habitat monitoring will be conducted for the duration of the Entiat River IMW study.

A quantitative evaluation of fish use will be achieved through seasonal mark-recapture sampling (for example, up to three seasons: winter, summer, and fall) and year round antenna monitoring (condition dependent). During 2014, up to six off-channel sites will be chosen for this project. Sites will be selected from within the current IMW boundaries for the Entiat River and will be distributed throughout the study area. Sites will include a variety of both existing and planned off-channel habitat types. Cascadia Conservation District will secure all necessary landowner permissions for selected sites.
WE Agreement Type:
Contracted
Deliverable Specification:
Quality controlled raw data and quality controlled summarized fish species and size data with GPS locations, will be uploaded by December 31, 2014 to the ISEMP status and effectiveness monitoring database. Notice will be provided to BPA and Terraqua, Inc. when the data has been uploaded. The contractor will be responsible for all quality assurance/quality control steps necessary to ensure that data is properly collected and entered.

Data will include:
1. Species composition will be inferred from each fish capture event. Capture probability will be calculated for each capture method and catch-per-unit-effort will be recorded.
2. Steelhead and Chinook salmon abundance will be estimated by conducting mark-recapture surveys where fish are PIT tagged within each off-channel site. This may include abundance estimates of non-target taxa (whitefish, sculpin, etc.) if present in sufficient numbers.
3. Species specific site use patterns will be determined through analysis of data collected from PIT tag antennas maintained within each site. Antennas will be operated continuously throughout the year with limited exceptions.
4. Steelhead age composition analysis will be inferred from the analysis of recaptured PIT tagged fish and may include recaptures at other locations (RST and other mark-recaptures sampling sites) if within site recaptures are insufficient.
5. Estimates of growth per day will be obtained from within site recaptures of PIT tagged fish. Recaptures at other locations will be included only when the time between the fish leaving the study site and the recapture is considered negligible.
6. Seasonal survival estimates will be obtained from a combination of recaptures and antenna resightings.

During 2014, habitat assessments and potentially macroinvertebrate monitoring will be conducted by Terraqua, Inc. staff. Habitat assessments will be conducted in concert to the greatest extent possible with off-channel mark-recapture sampling periods. The MCRFRO will operate fixed water temperature data-loggers and will begin work to establish point discharge estimates at each site.

Data dissemination
Tagging files generated from mark-recapture sampling will be submitted to PTAGIS directly following the sampling period. Antenna interrogation data will be downloaded and submitted to PTAGIS weekly. A review of all related activities and outcomes will be included within our current annual report to BPA and made available to all interested parties.
WSE Effective Budget:
$47,008
% of Total WSE Effective Budget:
7.80%
WSE Start:
02/01/2014
WSE End:
01/30/2015
WSE Completion:
12/31/2014
WSE Progress:
Concluded
WSE ID Continued From:
n/a
WSE ID Continued To:
n/a
Finite or Recurring:
Recurring

SOWRevision Planned Updated Contractor Comments (optional) BPA Comments (optional)
Work Element Budget (Current Performance Period) $47,008 $47,008

9 Milestones
Sort Type Title Start End Status Modified By Modified Date
A EC Environmental compliance requirements complete 2/1/2014 3/1/2014 Concluded Pamela Nelle 11/18/2013 1:52:15 PM
Description: On-the-ground work associated with this work element cannot proceed until this milestone is complete. Milestone is complete when final documentation is received from BPA environmental compliance staff (completion can be based on pre-existing environmental documentation from BPA).
B PUBPROTOCOL Review, revise, and Publish protocol, study design, and methods in monitoringmethods.org 2/1/2014 1/30/2015 Concluded Pamela Nelle 11/18/2013 2:16:52 PM
Description: The Protocol (including temporal and spatial design) and Methods for this work element are stored at monitoringmethods.org and need to be finalized (i.e., "Published" through monitoringmethods.org), preferably prior to data collection. Preparations for contract renewals must include reviewing any previously published Protocols/Methods to ensure that they are consistent with how work will be done in any subsequent contract.
C Site selection 2/1/2014 3/30/2014 Concluded Pamela Nelle 11/18/2013 1:52:15 PM
Description: Compile list of current and proposed off-channel habitats and select sites.
D Landowner access 2/1/2014 3/30/2014 Concluded Pamela Nelle 11/18/2013 1:52:16 PM
Description: Submit list of selected sites to CCD for access to be determined.
E O&M Instream PIT tag detection arrays 2/1/2014 1/30/2015 Concluded Pamela Nelle 11/18/2013 1:52:16 PM
Description: Coordinate antenna construction needs with WDFW (# of antenna, size, and power requirements).
F Habitat quantification 2/1/2014 10/31/2014 Concluded Pamela Nelle 11/18/2013 1:52:16 PM
Description: Coordinate habitat surveys with Terraqua, Inc.
G Install and maintain temperature loggers 2/1/2014 1/30/2015 Concluded Pamela Nelle 11/18/2013 1:52:16 PM
Description: Install and maintain temperature data loggers
H Mark-recapture sampling 2/1/2014 10/31/2014 Concluded Pamela Nelle 11/18/2013 1:52:17 PM
Description: Conduct a mark-recapture sampling study in 6 off-channel sites.
I DELIV Fish monitoring data in mainstem off-channel habitat in the Entiat River subbasin 12/31/2014 Concluded Pamela Nelle 11/22/2013 12:21:58 PM
Description: Quality controlled raw data and quality controlled summarized fish species and size data with GPS locations, will be uploaded by December 31, 2014 to the ISEMP status and effectiveness monitoring database. Notice will be provided to BPA and Terraqua, Inc. when the data has been uploaded. The contractor will be responsible for all quality assurance/quality control steps necessary to ensure that data is properly collected and entered. Data will include: 1. Species composition will be inferred from each fish capture event. Capture probability will be calculated for each capture method and catch-per-unit-effort will be recorded. 2. Steelhead and Chinook salmon abundance will be estimated by conducting mark-recapture surveys where fish are PIT tagged within each off-channel site. This may include abundance estimates of non-target taxa (whitefish, sculpin, etc.) if present in sufficient numbers. 3. Species specific site use patterns will be determined through analysis of data collected from PIT tag antennas maintained within each site. Antennas will be operated continuously throughout the year with limited exceptions. 4. Steelhead age composition analysis will be inferred from the analysis of recaptured PIT tagged fish and may include recaptures at other locations (RST and other mark-recaptures sampling sites) if within site recaptures are insufficient. 5. Estimates of growth per day will be obtained from within site recaptures of PIT tagged fish. Recaptures at other locations will be included only when the time between the fish leaving the study site and the recapture is considered negligible. 6. Seasonal survival estimates will be obtained from a combination of recaptures and antenna resightings. During 2014, habitat assessments and potentially macroinvertebrate monitoring will be conducted by Terraqua, Inc. staff. Habitat assessments will be conducted in concert to the greatest extent possible with off-channel mark-recapture sampling periods. The MCRFRO will operate fixed water temperature data-loggers and will begin work to establish point discharge estimates at each site. Data dissemination Tagging files generated from mark-recapture sampling will be submitted to PTAGIS directly following the sampling period. Antenna interrogation data will be downloaded and submitted to PTAGIS weekly. A review of all related activities and outcomes will be included within our current annual report to BPA and made available to all interested parties.

Work Site ID Latitude Longitude State County Province Subbasin
70304 47.731567 -120.363462 Washington Chelan Columbia Cascade Entiat

Primary Focal Species:
Chinook (O. tshawytscha) - Upper Columbia River Spring ESU (Endangered); Steelhead (O. mykiss) - Upper Columbia River DPS (Threatened)
Secondary Focal Species:
None

Title Link
PTAGIS Website http://www.ptagis.org/
Study Plan Name Study Plan Owner Protocol State Sample Design Name
Entiat Intensively Monitored Watershed (2003-017-00) v1.0 v1.0 Carol Volk Draft Conduct mainstem off-channel effectiveness monitoring as part of Entiat IMW - US Fish and Wildlife Service (USFWS) v1.0

ID Name Type Optional Customized Based On Status
188 Electro Fishing v1.0 Data Collection No N/A Draft
189 Electro Fishing-Survey Event v1.0 Data Collection No N/A Expired
201 Fish Capture-Angling v1.0 Data Collection No N/A Finalized
202 Fish Capture-Dip Net Supplement to Snorkel v1.0 Data Collection No N/A Finalized
203 Fish Capture-Electro Herding v1.0 Data Collection No N/A Draft
204 Fish Capture-Seining v1.0 Data Collection No N/A Finalized
205 Fish Capture-Snorkel Herding v1.0 Data Collection No N/A Finalized
206 Fish Capture-Survey Event v1.0 Data Collection No N/A Expired
746 Growth Rate for Individual Fish v1.0 Data Analysis/Interpretation No N/A Finalized
214 Habitat-Channel Cross Sections v1.0 Data Collection No N/A Revising
215 Habitat-Channel Transects v1.0 Data Collection No N/A Revising
217 Habitat-Fish Cover v1.0 Data Collection No N/A Finalized
219 Habitat-Large Woody Debris Assessment v1.0 Data Collection No N/A Revising
220 Habitat-Longitudinal Profile-Habitat Units v1.0 Data Collection No N/A Finalized
222 Habitat-Pool Sampling v1.0 Data Collection No N/A Revising
223 Habitat-Riparian Assessment-Canopy, Understory and Groundcover Aerial Estimates v1.0 Data Collection No N/A Finalized
226 Habitat-Site Lay Out v1.0 Data Collection No N/A Revising
228 Habitat-Survey Event v1.0 Data Collection No N/A Expired
234 Macroinvertebrates-Benthic Field Collection v1.0 Data Collection No N/A Finalized
235 Macroinvertebrates-Drift Field Sampling v1.0 Data Collection No N/A Finalized
236 Macroinvertebrates-Survey Event v1.0 Data Collection No N/A Expired
322 Riparian Planting-Survey Event v1.0 Data Collection No N/A Revising
271 Rotary Screw Trap-Efficiency Trial v1.0 Data Collection No N/A Finalized
272 Rotary Screw Trap-Fish Count By Species Group v1.0 Data Collection No N/A Finalized
273 Rotary Screw Trap-Individual Fish Measurements v1.0 Data Collection No N/A Revising
279 Site Establishment-Monumented Site v1.0 Data Collection No N/A Finalized
281 Snorkel within Habitat Units v1.0 Data Collection No N/A Archived
282 Snorkeling v1.0 Data Collection No N/A Expired
286 Spawning Survey-Spawners v1.0 Data Collection No N/A Finalized
287 Spawning Survey-Survey Event v1.0 Data Collection No N/A Finalized
326 Survey Event-Snorkel Observation v1.0 Data Collection No N/A Expired
315 Water Quality-Survey Event v1.0 Data Collection No N/A Expired

Title Category Subcategory Subcategory focus 1 Subcategory focus 2
Classification of Ecological or Geological Attribute Form/Morphology (ID: 31) Habitat Type: Multiple NA
Classification of Ecological or Geological Attribute Habitat Quality (ID: 33) Habitat Type: Multiple NA
Classification of Ecological or Geological Attribute Land Ownership (ID: 34) NA NA
Classification of Ecological or Geological Attribute Land Use (ID: 35) NA NA
Classification of Ecological or Geological Attribute Habitat Type (ID: 192) NA NA
Fish Abundance of Fish (ID: 46) Fish Life Stage: Juvenile - Parr Fish Origin: Natural
Fish Abundance of Fish (ID: 46) Fish Life Stage: Juvenile - Migrant Fish Origin: Natural
Fish Abundance of Fish (ID: 46) Fish Life Stage: Adult - Returner Fish Origin: Both
Fish Abundance of Fish (ID: 46) Fish Life Stage: Adult - Spawner Fish Origin: Both
Fish Abundance of Fish (ID: 46) Fish Life Stage: Adult - Carcass Fish Origin: Both
Fish Age: Fish (ID: 48) Fish Life Stage: Juvenile Fish Fish Origin: Natural
Fish Age: Fish (ID: 48) Fish Life Stage: Adult Fish Fish Origin: Natural
Fish Carrying Capacity: Fish (ID: 51) NA NA
Fish Composition: Fish Species Assemblage (ID: 56) Fish Life Stage: Juvenile Fish Fish Origin: Both
Fish Condition of Life Stage: Fish (ID: 57) Fish Life Stage: Juvenile Fish NA
Fish Density of Fish Species (ID: 59) Fish Life Stage: Juvenile Fish NA
Fish Distribution of Fish Species (ID: 62) Fish Life Stage: Juvenile Fish NA
Fish Diversity of Fish: Change (ID: 64) Fish Life Stage: Juvenile Fish NA
Fish Diversity of Fish: Change (ID: 64) Fish Life Stage: Adult Fish NA
Fish Growth Rate: Fish (ID: 73) Fish Life Stage: Juvenile Fish NA
Fish Length: Fish Species (ID: 75) Fish Life Stage: Juvenile Fish NA
Fish Length: Fish Species (ID: 75) Fish Life Stage: Adult Fish NA
Fish Mortality: Fish (ID: 78) Fish Life Stage: Juvenile Fish NA
Fish Progeny-per-Parent Ratio (P:P) (Productivity) (ID: 86) Fish Life Stage: RANGE: Adult to Juvenile NA
Fish Sex Ratio: Fish (ID: 92) Fish Life Stage: RANGE: Adult to Adult Fish Origin: Both
Fish Stray Rate (ID: 96) Fish Origin: Both NA
Fish Survival: Fish (ID: 97) Fish Life Stage: Juvenile Fish Fish Origin: Both
Fish Survival: Fish (ID: 97) Fish Life Stage: RANGE: Adult to Juvenile Fish Origin: Both
Fish Timing of Life Stage: Fish (ID: 101) Fish Life Stage: Juvenile - Migrant NA
Fish Timing of Life Stage: Fish (ID: 101) Fish Life Stage: Juvenile Fish NA
Fish Mark/Tag Application (ID: 201) NA NA
Fish Origin (ID: 202) NA NA
Fish Scales (ID: 203) NA NA
Fish Weight: Fish (ID: 206) NA NA
Fish Weight: Fish (ID: 206) Fish Life Stage: Juvenile Fish NA
Fish Mark/Tag Recovery or Detection (ID: 381) NA NA
TBD Fish Spawning/Nesting (ID: 507) Fish Origin: Natural NA
Landscape Form & Geomorphology Abundance of Habitat Types (ID: 15) NA NA
Landscape Form & Geomorphology Depth: Bathymetry (ID: 17) NA NA
Landscape Form & Geomorphology Cover (ID: 20) Habitat Type: Overhanging Vegetation NA
Landscape Form & Geomorphology Cover (ID: 20) Habitat Type: Terrestrial Vegetation Zones NA
Landscape Form & Geomorphology Density of Habitat Type (ID: 21) Habitat Type: Multiple NA
Landscape Form & Geomorphology Distance Between Habitat Types (ID: 23) Habitat Type: Multiple NA
Landscape Form & Geomorphology Distribution of Barriers (ID: 24) NA NA
Landscape Form & Geomorphology Distribution of Instream Wood (ID: 25) NA NA
Landscape Form & Geomorphology Edge/Density/Sinuosity (ID: 29) NA NA
Landscape Form & Geomorphology Elevation (ID: 30) NA NA
Landscape Form & Geomorphology Gradient (ID: 32) NA NA
Landscape Form & Geomorphology Length/Width/Area (ID: 36) Habitat Type: Multiple NA
Landscape Form & Geomorphology Depth: Pool (ID: 37) NA NA
Landscape Form & Geomorphology Species Cover (ID: 39) Habitat Type: Multiple NA
Landscape Form & Geomorphology Width to Depth Ratio (ID: 43) NA NA
Landscape Form & Geomorphology Width: Bankfull (ID: 44) NA NA
Landscape Form & Geomorphology Width: Wetted (ID: 45) NA NA
Landscape Form & Geomorphology Depth/Height: Bankfull (ID: 188) NA NA
Landscape Form & Geomorphology Water Surface Elevation (ID: 198) NA NA
tbd Landscape Form & Geomorphology Aquatic or Floodplain Geomorphology: Area (ID: 369) Habitat Type: Channel: Pools NA
tbd Landscape Form & Geomorphology Density of Barriers (ID: 373) NA NA
tbd Landscape Form & Geomorphology Density of Instream Wood (ID: 374) NA NA
tbd Landscape Form & Geomorphology Distribution of Habitat Type (ID: 440) Habitat Type: Channel: Pools NA
Macroinvertebrates Abundance of Macroinvertebrates (ID: 112) NA NA
Macroinvertebrates Composition: Macroinvertebrate Species Assemblage (ID: 113) NA NA
tbd Sediment/Substrate/Soils Composition: Substrate/Soil-Dominant Type (ID: 133) NA NA
Sediment/Substrate/Soils Depth-Fines (ID: 134) NA NA
Time Time: Actual (ID: 120) NA NA
Time Time: Duration (ID: 121) NA NA
Water Quality Conductivity (ID: 154) NA NA
Water Quality Water Temperature (ID: 162) NA NA