Title | Link |
---|---|
NOAA Ocean Indicators Tool | http://www.nwfsc.noaa.gov |
NOAA Public Access to Research Results (PARR) | https://www.ngdc.noaa.gov/parr.html |
StreamNet Data Store | https://app.streamnet.org/datastore_search_classic.cfm |
This page provides details of the selected work element.
SOWRevision | Planned | Updated | Contractor Comments (optional) | BPA Comments (optional) |
---|---|---|---|---|
1. 84062 REL 1 (01/01/2023 - 12/31/2023) | $348,750 | $352,171 | ||
Work Element Budget (Current Performance Period) | $354,142 | $352,171 |
Sort | Type | Title | Start | End | Status | Modified By | Modified Date |
---|---|---|---|---|---|---|---|
A | PUBPROTOCOL | Review, revise, & finalize Study Plan sample design protocol and methds in monitoringResources.org | 1/2/2023 | 12/29/2023 | Concluded | Anne Creason | 10/4/2023 8:49:26 AM |
Description: The Study Plan's Sample Design, Protocol and Methods for this work element are stored at MonitoringResources.org and need to be completed (i.e., "Finalized" through MonitoringResources.org), preferably prior to data analysis but must be completed upon submittal of your annual report. Preparations for contract renewals must include reviewing any previously finalized Sample Designs, Protocols & Methods to ensure that they are consistent with how work will be done in any subsequent contract. | |||||||
B | Survey report -- May 2023 | 5/1/2023 | 12/31/2023 | Concluded | Anne Creason | 10/4/2023 8:49:26 AM | |
Description: May 2023 survey report OSU Lead: Morgan Survey reports will be submitted electronically and will be submitted to BPA by the end of the year of each survey. Survey reports will be completed and include information on: sampling locations, physical conditions at each station. These reports provide a description of survey objectives, results of the survey as well as a summary of data collected on each juvenile salmon sampling survey and include the following items: • Tables showing: (1) station and station location along with start position of each trawl (lat and long), start and end time and trawl duration and trawl duration; (2) hydrographic data at each station (sea surface temperature, sea surface salinity, fluorometer voltage, % transmission, depth and value of oxygen minimum) (3) a table that lists the catches of taxa in the trawl, by station. (4) Information on Genetic Stock Composition (this could be delayed due to lack of lab access during NOAA Covid Phase Level) • Tables showing number of salmonids caught in each haul along with catch per unit effort in units of number of fish caught per km towed, • Charts showing (in plan view) the spatial distribution of 1m temperature, 1m salinity, 1m % transmission, minimum oxygen values and CPUE of each salmonid taxa. | |||||||
C | Otoliths data analysis--OSU--subset of May 2015-2023 surveys | 1/1/2023 | 12/31/2023 | Concluded | Anne Creason | 10/4/2023 8:49:26 AM | |
Description: Otolith analyses on as many individuals from both Mid/Upper Columbia River, Spring/Summer Chinook and Snake Spring Chinook from May 2023 and samples as a measure of ocean-estuarine residence time as it relates to growth. Continue analysis on May 2015-2022 otolith samples. There was no May 2020 survey due to COVID. We intend to compare attributes from fish that have just arrived in the plume to those from fish that have been in the ocean for longer periods. This requires analysis of strontium/calcium ratios in their otoliths and structural analysis of daily increments to get an accurate estimate of ocean residence time. | |||||||
D | Stomach sample data analysis--OSU-- subset of May 2015-2023 surveys | 1/1/2023 | 12/31/2023 | Concluded | Anne Creason | 10/4/2023 8:49:26 AM | |
Description: Assist with analysis of a subset of stomach samples for diets from ocean collected juvenile Chinook salmon (Mid/Up CR Chinook, spring/summer Chinook, Snake spring) and steelhead from May 2023. Continue analysis of diets from May 2015-2022. There was no May 2020 survey due to COVID. | |||||||
E | Survey report -- June 2023 | 7/15/2023 | 12/31/2023 | Concluded | Anne Creason | 10/4/2023 8:49:26 AM | |
Description: June 2023 survey report OSU Lead: Morgan Survey reports will be submitted electronically and will be submitted to BPA by the end of the year of each survey. Survey Reports will be completed and include information on: sampling locations, physical conditions at each station. These reports provide a description of survey objectives, results of the survey as well as a summary of data collected on each juvenile salmon sampling survey and include the following items: • Tables showing: (1) station and station location along with start position of each trawl (lat and long), start and end time and trawl duration and trawl duration; (2) hydrographic data at each station (sea surface temperature, sea surface salinity, fluorometer voltage, % transmission, depth and value of oxygen minimum) (3) a table that lists the catches of taxa in the trawl, by station. • Tables showing number of salmonids caught in each haul along with catch per unit effort in units of number of fish caught per km towed, • Charts showing (in plan view) the spatial distribution of 1m temperature, 1m salinity, 1m % transmission, minimum oxygen values and CPUE of each salmonid taxa. | |||||||
F | DELIV | Deliverable: An accessible, error-checked data set with metadata | 12/31/2023 | Concluded | Anne Creason | 10/4/2023 8:49:26 AM | |
Description: An error-checked data set and metadata will be stored consistent with the database(s) and protocol documented in contract. (Optional: This includes the following methods: (List methods).) Data will be publicly accessible, with stipulations for limitations of use and data generator attribution. Additional implementation notes and analysis will be in the Annual Report, or attached to the protocol as implementation notes. The data file/s will be stored in the data repository/ies specified in the contract. In your annual report (WE 132), you are required to provide a link to your data set with a file name in the report's first appendix. If not web accessible, provide instructions (e.g., file name, directory, or position title) for accessing data. |
Metric | Planned | Actual | Contractor Comments | Measures | HLIs |
---|---|---|---|---|---|
1464. Primary R, M, and E Focal Strategy [Population Status, Hydrosystem, Tributary Habitat, Estuary/Ocean, Harvest, Hatchery, Predation, Multiple Strategies] | Estuary/Ocean | Estuary/Ocean | |||
1472. Primary R, M, and E Type [Status and Trend Monitoring, Action Effectiveness Research, Uncertainties Research, Project Implementation/ Compliance Monitoring] | Uncertainty Research | Uncertainty Research | |||
1478. Secondary R, M, and E Type [Status and Trend Monitoring, Action Effectiveness Research, Uncertainties Research, Project Implementation/ Compliance Monitoring] | Status and Trend Monitoring | Status and Trend Monitoring | |||
1495. Secondary R, M, and E Focal Strategy [Population Status, Hydrosystem, Tributary Habitat, Estuary/Ocean, Harvest, Hatchery, Predation, Multiple Strategies] | Multiple Strategies | Multiple Strategies |
Title | Link |
---|---|
NOAA Ocean Indicators Tool | http://www.nwfsc.noaa.gov |
NOAA Public Access to Research Results (PARR) | https://www.ngdc.noaa.gov/parr.html |
StreamNet Data Store | https://app.streamnet.org/datastore_search_classic.cfm |
Study Plan Name | Study Plan Owner | Protocol State | Sample Design Name |
---|---|---|---|
Ocean Survey of Juvenile Salmon (1998-014-00) v1.0 | Cheryl Morgan | Draft | Assess the role of the estuary and plume on salmon growth and survival - Oregon State University v1.0 |
ID | Name | Type | Optional | Customized Based On | Status |
---|---|---|---|---|---|
4088 | Columbia estuary purse seining v1.0 | Data Collection | Yes | N/A | Finalized |
4090 | Individual-Based Model of Salmon Migration v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
650 | Modified Assessing growth in juvenile salmon using plasma Insulin-like growth factor-I (IGF-1) v1.0 | Data Collection | No | Assessing growth in juvenile salmon using plasma Insulin-like growth factor-I (IGF-1) v1.0 | Finalized |
1376 | Northwest Fisheries Science Center Ocean Salmon Survey DNA extraction for Renibacterium salmoninarum v1.0 | Data Collection | Yes | N/A | Finalized |
1405 | Northwest Fisheries Science Center Ocean Salmon Survey Macroparasite Recovery v1.0 | Data Collection | No | N/A | Finalized |
1379 | Northwest Fisheries Science Center Ocean Salmon Survey Nested Polymerase Chain Reaction (PCR) to detect Renibacterium salmoninarum v1.0 | Data Collection | Yes | N/A | Finalized |
1380 | Northwest Fisheries Science Center Ocean Salmon Survey Renibacterium salmoninarum ABC gene Quantitative PCR (qPCR) v1.0 | Data Collection | Yes | N/A | Finalized |
1707 | Northwest Fishery Science Center Ocean Salmon Survey determination of chlorophyll a concentration v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
1361 | NWFS_Center_Ocean Salmon Survey Bongo Net Marine Zooplantkon Sampling v1.0 | Data Collection | No | N/A | Finalized |
4081 | NWFS_Center_Ocean Salmon Survey Bongo Net Zooplankton Analysis v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
1375 | NWFS_Center_Ocean Salmon Survey CTD Data Processing v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
1706 | NWFS_Center_Ocean Salmon Survey Data Analysis for Vessel-based Marine Bird Counts v1.0 | Data Analysis/Interpretation | Yes | N/A | Finalized |
1704 | NWFS_Center_Ocean Salmon Survey Hydroacoustic Data Processing and Analysis v1.0 | Data Analysis/Interpretation | Yes | N/A | Finalized |
1382 | NWFS_Center_Ocean Salmon Survey juvenile salmon Trophic analysis v1.0 | Data Collection | No | N/A | Finalized |
1371 | NWFS_Center_Ocean Salmon Survey Marine Fish Sampling v1.0 | Data Collection | No | N/A | Finalized |
1373 | NWFS_Center_Ocean Salmon Survey Ocean Water Chemistry and Chlorophyll Sampling v1.0 | Data Collection | No | N/A | Finalized |
1343 | NWFS_Center_Ocean Salmon Survey Salmon Stock Identification v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
1372 | NWFS_Center_Ocean Salmon Survey Salmonid Marine Survival v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
4098 | NWFS_Center_Ocean Salmon Survey Vertical Net Marine Zooplanktkon Sampling v1.0 | Data Collection | No | N/A | Finalized |
1722 | NWFS_Center_Ocean Salmon Survey Vertical Net Zooplankton Analysis v1.0 | Data Analysis/Interpretation | Yes | N/A | Finalized |
4093 | NWFSC_Ocean Salmon Survey Analysis of Juvenile Salmon Predation Risk v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
4092 | NWFSCenter_Ichthyoplankton Ocean salmon prey biomass data analysis v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
4134 | NWFSCenter_Ichthyoplankton Ocean salmon prey community analysis v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
4091 | NWFSCenter_Ichthyoplankton Ocean salmon prey sampling v1.0 | Data Collection | No | N/A | Finalized |
1374 | NWFSCenter_Ocean Salmon Survey Catch per Unit Effort v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
4089 | NWFSCenter_Ocean Salmon Survey juvenile salmon Trophic data analysis v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
4094 | NWFSCenter_Ocean Salmon Survey Ocean Water Nutrient Analysis v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
1359 | NWFSCenter_Ocean Salmon Survey Oceanographic Sampling v1.0 | Data Collection | No | N/A | Finalized |
1404 | NWFSCenter_Ocean Salmon Survey Salmon Necropsy v1.0 | Data Collection | No | N/A | Finalized |
1705 | NWFSCenter_Ocean Salmon Survey Vessel-based Marine Bird Counts - Strip Transect Sampling v1.0 | Data Collection | Yes | N/A | Finalized |
1413 | NWFSCSalmon Ocean Survey: Reconstruction of juvenile migratory history and marine growth using otolith structure and chemistry v1.0 | Data Analysis/Interpretation | Yes | N/A | Finalized |
1703 | Ocean Salmon Survey Hydroacoustic Surveys v1.0 | Data Collection | Yes | N/A | Finalized |
1341 | Parentage assignments using SNPPIT software v1.0 | Data Analysis/Interpretation | No | N/A | Finalized |
5446 | SNP genotyping using Genotyping in Thousands (GT-seq) on Illumina Sequencer platform v1.0 | Data Collection | No | N/A | Finalized |
Title | Category | Subcategory | Subcategory focus 1 | Subcategory focus 2 |
---|---|---|---|---|
Abundance of juvenile salmonids | Fish | Abundance of Fish (ID: 46) | Fish Life Stage: Juvenile Fish | Fish Origin: Both |
Species composition of fish | Fish | Composition: Fish Species Assemblage (ID: 56) | Fish Life Stage: Juvenile Fish | Fish Origin: Both |
Condition indices of fish | Fish | Condition of Life Stage: Fish (ID: 57) | Fish Life Stage: Juvenile Fish | NA |
Distribution of fish | Fish | Distribution of Fish Species (ID: 62) | Fish Life Stage: Juvenile Fish | NA |
Food web interactions | Fish | Food Web Interaction: Fish (ID: 69) | NA | NA |
Genetic stock identification | Fish | Stock Identity (ID: 95) | Fish Life Stage: RANGE: Juvenile to Juvenile | NA |
Timing of life stage of fish | Fish | Timing of Life Stage: Fish (ID: 101) | Fish Life Stage: Juvenile Fish | NA |
Oceanographic sampling | Hydrology/Water Quantity | Ocean Conditions (ID: 106) | NA | NA |
Plankton Species Composition | Plankton | Composition: Plankton Assemblage (ID: 127) | Species Life Stage: RANGE: Juvenile to Adult Species | NA |
Plankton Density | Plankton | Abundance of Plankton (ID: 250) | Species Life Stage: RANGE: Juvenile to Adult Species | NA |
Name | Value |
---|---|
Latitude, Longitude | 44.719299, -124.175278 |
Latitude, Longitude | 44.723202, -124.804245 |
Latitude, Longitude | 48.30973, -125.456235 |
Latitude, Longitude | 48.317036, -124.819028 |