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Contract 26934 REL 4: 2003-038-00 EXP EVAL RESTOR OF SNAKE R CHINOOK
Project Number:
Title:
Eval Restor Of Snake R Chinook
Stage:
Closed
Area:
Province Subbasin %
Basinwide - 100.00%
Contract Number:
26934 REL 4
Contract Title:
2003-038-00 EXP EVAL RESTOR OF SNAKE R CHINOOK
Contract Continuation:
Previous: Next:
652 REL 31: 2003-038-00 EXP EVAL RESTOR OF SNAKE R CHINOOK
Contract Status:
Closed
Contract Description:
Evaluate the Restoration Potential of Snake River Fall Chinook Salmon Spawning Habitat
Statement of Work and Budget FY2007

The goal of this study is to identify hydrosystem operational conditions that could expand and restore spawning populations the Snake River stock of fall Chinook salmon. This project addresses NOAA's 2000 FCRPS BiOp RPA 155, and contributes to the ESA commitments made by BPA and the FCRPS Action Agencies under NOAA's revised 2004 BiOp.  This project is identified in the Crosswalk of Draft UPA (August 2004, page 30) as the project that is implementing RPA 155.  The objectives of this project are consistent with and are integral components for implementing the 2005-2007 Final Implementation Plan for the FCRPS Updated Proposed Action (May 2005).  This project is specifically identified in the Implementation Plan (page 41, Table 22) as one of the hydrosystem RM&E projects that the Action Ag... encies will implement in the 2005-2007 timeframe to address their UPA commitments.  Continuation of this project helps reduce critical hydrosystem uncertainties and provides status monitoring for restoring Snake River fall Chinook salmon spawning habitat.

This project was approved for FY2004 funding on October 2, 2003, with a contract start date of December 15, 2003.  The project scope included one reference site (Wanapum Dam tailrace in the Columbia River) and two study sites (tailraces of Ice Harbor and Lower Granite dams) in the lower Snake River.  During FY2004 we collected physical habitat data (bathymetry, substrate, channel morphology) at the reference site, spanning 10 river kilometers and 2000+ fall Chinook salmon redds.  Also during FY2004 we completed hydrodynamic modeling for a wide range of flow regimes at the reference site.  During FY2005 we collected physical habitat data (bathymetry, substrate, channel morphology) at the lower Snake River study sites, covering 30 river kilometers. Also during FY2005 we completed additional hydrodynamic modeling at the reference site, and initiated modeling at the lower Snake River study sites.  Hydrodynamic modeling at the lower Snake River study sites was hampered by the lack of high resolution and high quality bathymetry data.  The lack of bathymetry data forced us to refocus our FY2005 efforts more on bathymetry data collection and processing and less on hydrodynamic modeling.  In late-FY2005 we completed the initial hydrodynamic modeling for a wide range of flow regimes at both of the study sites in the lower Snake River.  Work in FY2006 focusesd on collecting additional physical habitat data at the study sites, completing the hydrodynamic modeling, and completing the analyses necessary for determing the presence and extent of similar characteristics at the reference site and study sites.  The FY06 final report will summarize results describing the quantity of potential fall Chinook salmon spawning habitat in the Ice Harbor and Lower Granite tailraces.

The research to be conducted under this proposal will evaluate the restoration potential of mainstem habitats for fall Chinook salmon.  The studies will address two research questions: “Are there sections not currently used by spawning fall Chinook salmon within the impounded lower Snake River that possess the physical characteristics for potentially suitable fall Chinook spawning habitat?” and “Can hydrosystem operations affecting these sections be adjusted such that the sections closely resemble the physical characteristics of current fall Chinook spawning areas in similar physical settings?” We propose to focus our efforts at study sites downstream from each of the four lower Snake River dams (Ice Harbor, Lower Monumental, Little Goose, Lower Granite).  The research will be carried out in two phases at each site.  The first phase involves estimating the quantity of potential fall Chinook salmon spawning habitat, while the second phase involves evaluating the quality of the potential habitat.  These two phases are necessary for accurate estimates of future habitat use, because, as previously described, estimates of just habitat quantity tend to overestimate habitat use.  Unrealistic fall Chinook salmon production goals for the lower Snake River may be developed in the absence of accurate estimates of both habitat quantity and quality. Years 1 (FY07) and 2 (FY08) of the study will focus on data collection, analysis and summary.  This includes evaluating the quality of potential habitat at the Ice Harbor and Lower Granite study sites, and quantity of potential habitat at the Lower Monumental and Little Goose study sites. Years 2 (FY08) and 3 (FY09) of the study will focus on modeling alternative flow scenarios and evaluating habitat quality at the Lower Monumental and Little Goose study sites, culminating in a report on recommended restoration options.  This report will include a study plan for 2 years of monitoring and evaluation of the physical characteristics resulting from altered flow regimes, should such recommendations be implemented.

The study sites will be evaluated under existing structural configurations at the dams (i.e., without partial removal of a dam structure), and alternative operational scenarios (e.g., varying forebay/tailwater elevations). The areas to be studied represent tailwater habitat (i.e., riverine segments extending from a dam downstream to the backwater influence from the next dam downstream).  We will use a reference site, indicative of current fall Chinook salmon spawning areas in tailwater habitat, against which to compare the physical characteristics of each study site.  The reference site for tailwater habitats will be the section extending downstream from the Wanapum Dam tailrace on the Columbia River.  Escapement estimates for each of the last five years indicate more than 9000 adult fall Chinook salmon returned to this area, accounting for more than 2100 redds within a 5 km section of river (Grant Co. PUD, personal communications; McMichael et al. 2003).
  
Account Type(s):
Expense
Contract Start Date:
10/01/2006
Contract End Date:
01/31/2007
Current Contract Value:
$46,760
Expenditures:
$46,760

* Expenditures data includes accruals and are based on data through 31-Mar-2025.

BPA CO:
BPA COR:
Env. Compliance Lead:
Work Order Task(s):
Contract Type:
Release
Pricing Method:
Cost Reimbursement (CNF)
MarkerMarkerMarkerMarkerMarker
20 km
10 mi
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Full Name Organization Write Permission Contact Role Email Work Phone
Terrie Bear Pacific Northwest National Laboratory No Administrative Contact terrie.bear@pnl.gov (509) 372-2623
Timothy Hanrahan (PNL) Pacific Northwest National Laboratory Yes Technical Contact tim.hanrahan@pnl.gov (509) 371-7182
Julie Hughes Pacific Northwest National Laboratory No Administrative Contact julie.hughes@pnl.gov (509) 371-7202
Paul Krueger Bonneville Power Administration Yes F&W Approver pqkrueger@bpa.gov (503) 230-5723
Jonathan McCloud Bonneville Power Administration Yes COR jmmccloud@bpa.gov (503) 230-3110
Marlene Meeks Pacific Northwest National Laboratory No Administrative Contact marlene.meeks@pnl.gov (509) 372-6258
Khanida Mote Bonneville Power Administration Yes Contracting Officer kpmote@bpa.gov (503) 230-4599
Janie Vickerman Pacific Northwest National Laboratory No Administrative Contact janie.vickerman@pnnl.gov (509) 371-7260
Nancy Weintraub Bonneville Power Administration No Env. Compliance Lead nhweintraub@bpa.gov (503) 230-5373


Viewing 8 of 8 Work Statement Elements
Sort Order
WSEV ID
WE ID
Work Element Name
Title
Description
WSE Effective Budget
% of Total WSE Effective Budget
WSE Start
WSE End
A18182165Produce Environmental Compliance DocumentationEnsure proper environmental clearanceWill work with BPA environmental staff if necessary to ensure proper environmental clearance is in place on work elements requiring environmental clearance.$00.00%10/01/200610/31/2006
B17334157Collect/Generate/Validate Field and Lab DataReference site physical habitat characteristicsQuantify the physical characteristics that define suitable fall Chinook spawning habitat the tailwater reference site (Wanapum Dam). Map spawning areas at the reference site. Use existing data indicating spawning areas and redd locations. If necessary, collect aerial photography to delineate spawning areas. Collect data on the physical characteristics of the spawning areas and throughout the reference site. The data to be collected will be metrics of physiography, hydrologic regime, channel morphology, substrate, hydraulics, water quality, and hyporheic exchange. The data will support analyses of habitat quantity and quality.$00.00%10/01/200609/30/2007
C17335157Collect/Generate/Validate Field and Lab DataLower Snake River physical habitat characteristicsUsing the physical characteristics identified at the reference site in Work Element A, quantify the physical characteristics at each of the Snake River study sites. Conduct a thorough analysis and summary of existing data for study sites, including site visits for reconnaissance level work. The research will be carried out in two phases at each site. The first phase involves estimating the quantity of potential fall Chinook salmon spawning habitat, while the second phase involves evaluating the quality of the potential habitat. Collect data on the physical characteristics of the study sites. The data to be collected will be metrics of physiography, hydrologic regime, channel morphology, substrate, hydraulics, water quality, and hyporheic exchange. These data will support the setup of a two-dimensional hydrodynamic model that will estimate hydraulic characteristics within each study site for different flow regimes. Estimating hydraulic characteristics through the use of a hydrodynamic model is necessary because the study sites are currently impounded. The data will support analyses of habitat quantity and quality. During years 1 (FY07) and 2 (FY08) we will evaluate the quality of potential habitat at the Ice Harbor and Lower Granite study sites, and the quantity of potential habitat at the Lower Monumental and Little Goose study sites. Years 2 (FY08) and 3 (FY09) of the study will focus on modeling alternative flow scenarios and evaluating habitat quality at the Lower Monumental and Little Goose study sites.$46,14497.88%10/01/200609/30/2007
D17348162Analyze/Interpret DataAnalyze lower Snake River study sitesApply hydrodynamic model(s) to the study sites to estimate two-dimensional hydraulic characteristics under different flow scenarios. Estimating hydraulic characteristics through the use of a hydrodynamic model is necessary because the study sites are currently impounded. Scenarios would include incremental drawdown of forebay elevations between spillway crest and normal operating pool, including an elevation that would allow the travel of shallow draft barges. The modeling evaluation would also include an analysis of flow scenarios by water-year type (extremely wet, wet, normal, dry, extremely dry) to account for natural variation in hydrologic regime. Water-year types would be determined based on runoff volume at The Dalles Dam by July 1. To simulate the spatial distribution of water depth and velocity under different project operating conditions, it is proposed that a two-dimensional depth-averaged hydrodynamic and water quality model be applied to the Ice Harbor and Lower Granite tailraces. We propose to use the existing two-dimensional MASS2 (Richmond et al., 2000) model to simulate the majority of the river section (i.e. from below Lower Granite Dam to the river's confluence with the Columbia). The MASS2 model has already been applied to these river reaches. In this project we will update the bathymetry, computational grid, and perform additional validation simulations using velocity and stage data collected for this project. MASS2 is a two-dimensional depth-averaged hydrodynamic and water quality model. The model simulates time-varying distributions of the depth-averaged velocities, water temperature, and total dissolved gas. The model is a finite-volume code that is formulated using the general principles described by Patankar (1980), and uses a structured multi-block scheme on a curvilinear grid system. Heat exchange at the air-water surface is computed using a physical based approach based upon commonly observed meteorological conditions (Edinger et al., 1974). Dissolved gas concentrations are transported using the two-dimensional form of the advection-diffusion equation, with appropriate source/sink terms for gas exchange. The model also includes a wetting-drying algorithm to simulate conditions where the wetted channel area is initially unknown or varies in time because the upstream inflow and/or downstream stage are unsteady. The wetting-drying capability is currently being used in unsteady simulations of hydraulic conditions in the Hanford Reach of the Columbia River. MASS2 has previously been calibrated and verified to portions of the Columbia and Snake River systems, including the lower Snake River from LGR to the Columbia River confluence (Richmond et al., 1999a). The model was then used to simulate gas concentrations under various flow release alternatives (Richmond et al., 2000). MASS2 has also been applied to simulate the sediment erosion and deposition in the river under impounded (current) and unimpounded (four lower Snake dams removed) conditions (Richmond et al., 1999b).$00.00%10/01/200609/30/2007
E17349162Analyze/Interpret DataCompare data at Columbia and Snake River tailrace sitesDetermine if physical characteristics at study sites resemble those at reference site. This involves comparing the physical processes measured and modeled at the reference site with the physical processes modeled and measured at the study sites.$00.00%10/01/200609/30/2007
F17350132Produce Progress (Annual) ReportProduce FY07 annual reportComplete a report summarizing the activities, accomplishments, and results to-date for FY07.$00.00%01/01/200709/30/2007
G17352119Manage and Administer ProjectsProject managementProvide oversight on the project throughout the performance period. Respond to BPA as requested, providing financial, contractual, and administrative documents. Prepare FY 2007 Statement of Work and submit no less than 90 days before end of current contract.$1,0002.12%05/15/200709/30/2007
H17353185Produce CBFish Status ReportPeriodic Status Reports for BPAThe Contractor shall report on the status of milestones and deliverables in Pisces. Reports shall be completed either monthly or quarterly as determined by the BPA COTR. Additionally, when indicating a deliverable milestone as COMPLETE, the contractor shall provide metrics and the final location (latitude and longitude) prior to submitting the report to the BPA COTR.$00.00%01/01/200709/30/2007
      
$47,144
   

Deliverable Title WSE Sort Letter, Number, Title Start End Concluded
Ensure proper environmental compliance A: 165. Ensure proper environmental clearance 10/31/2006 10/31/2006
Spatial data in GIS format and/or spreadsheet/database files B: 157. Reference site physical habitat characteristics 09/30/2007
Spatial data in GIS format and/or spreadsheet/database files C: 157. Lower Snake River physical habitat characteristics 09/30/2007
Spatial data in GIS format and/or spreadsheet/database files D: 162. Analyze lower Snake River study sites 09/30/2007
Spatial data in GIS format and/or spreadsheet/database files E: 162. Compare data at Columbia and Snake River tailrace sites 09/30/2007
FY07 annual report F: 132. Produce FY07 annual report 09/30/2007
Accruals, SOW, Budget, Spending Plan & Property Inventory Funding Package - Submit draft to COTR G: 119. Project management 09/30/2007

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Primary Focal Species Work Statement Elements
Chinook (O. tshawytscha) - Snake River Fall ESU (Threatened)
  • 1 instance of WE 157 Collect/Generate/Validate Field and Lab Data
  • 2 instances of WE 162 Analyze/Interpret Data
Chinook (O. tshawytscha) - Upper Columbia River Summer/Fall ESU
  • 1 instance of WE 157 Collect/Generate/Validate Field and Lab Data
  • 1 instance of WE 162 Analyze/Interpret Data

Sort WE ID WE Title NEPA NOAA USFWS NHPA Has Provisions Inadvertent Discovery Completed
A 165 Ensure proper environmental clearance 02/09/2007
B 157 Reference site physical habitat characteristics 02/09/2007
C 157 Lower Snake River physical habitat characteristics 02/09/2007
D 162 Analyze lower Snake River study sites 02/09/2007
E 162 Compare data at Columbia and Snake River tailrace sites 02/09/2007
F 132 Produce FY07 annual report 02/09/2007
G 119 Project management 02/09/2007
H 185 Periodic Status Reports for BPA 02/09/2007