The following qualifications are offered as advice to improve project design and monitoring, and should be addressed during contracting and subsequent proposals. No immediate response to the ISRP is required.

1. Purpose: Significance to Regional Programs, Technical Background, and Objectives

This proposal for the Red River along with ones for Newsome Creek, and Crooked and American Rivers is designed to restore habitat in the upper tributaries of the South Fork Clearwater River. The proposal includes a good summary of information relevant to the problems and limiting factors being addressed. Particularly helpful for this review were the concise summaries of the population units being targeted, their status, and their relationship to MPG and ESU viability assessments. The ISRP appreciates seeing consideration of Pacific lamprey and other trout species.

Two evaluations, the South Fork Clearwater Landscape Assessment and the Nez Perce Forest Plan, state that the South Fork and its upper tributaries have high potential for spring Chinook and steelhead production mainly due to topography and lack of development. Factors limiting the production of these species in the Red River were recently updated by the FCRPS BiOp Expert Panel Process and were also presented in the Red River Ecosystem Analysis at the Watershed Scale (EAWS). The limiting factors for Red River were identified as impaired channel complexity, elevated stream temperatures, passage barriers, and excessive sedimentation.

 Of the project’s nine objectives, eight address the limiting factors listed above, and four objectives, specifically reducing stream temperatures, reducing instream sedimentation, improving aquatic habitat diversity and complexity, and protecting and restoring riparian habitats list success criteria that can be measured. Desired end points for three others, removing anthropogenic barriers, restoring wetlands, and reducing the impact of existing roads, were not as fully developed. The end points for objective 1 (to increase anadromous fish productivity and production, and life stage specific survival through habitat improvement) still need to be defined. Targets for survival and productivity should be stated and the rationale used to establish them explained. Also, Objective 7 refers to Newsome Creek instead of Red River, which is presumably a typographic error.

2. History: Accomplishments, Results, and Adaptive Management (Evaluation of Results)

Approximately two miles of channel was reconstructed at the “Red River Narrows.” To complete this project, two acres of mine tailings were removed and the floodplain was re-graded to increase the width of the floodplain from 30 feet to over 100 feet. Stream sinuosity was also increased from 1.0 to 1.3, and three meander bends were added. Forty-one instream structures consisting of LWD, log jams, cobble fans, rock vanes, and other arrangements were added.

To reduce sedimentation, 43 miles of unneeded roads were decommissioned and 13 miles of roads were improved. Working with the U.S. Forest Service, five fish passage barriers have been replaced or removed, and an inventory of road crossings over streams in the Red River subbasin has been completed. Riparian zones have also been replanted. For example, in the Red River Narrows project area approximately 27,000 herbaceous plants of the 1 to 5-gallon size were planted along with 1,654 confers. In another restoration site, the Red River Meadows, approximately 26,000 ten to twenty cubic inch herbaceous and woody stock were planted along with 5,461 woody plants.

Onsite evaluations and results from monitoring programs are being used to adjust restoration approaches. Project monitoring allowed adaptive changes to the size of trees, shrubs, and herbaceous plants placed in riparian zones, and to the techniques used to plant them. Larger plants are being used, and they are now planted in terraced rows and protected by sod embankments. Culvert replacement has also changed since the project began. Bottomless culverts or bridges are used instead of typical squash pipe culverts so that flood level flows may pass without a large increase in velocity. Additionally, the sponsors are also installing control structures above, below, and in replacement culverts to reduce head cutting. Road decommissioning techniques have also evolved with fertilizer application to disturbed areas being discontinued in favor of pre- and post-weed treatment to reduce the presence of noxious weeds. Finally, changes in project direction and scope have occurred to meet the provisions of the FCRPS 2008 BiOp.

This proposal demonstrates that advice from the ISRP's review in 2006 has been taken seriously as the monitoring and adaptive management components of the proposal are much improved. However, the description of adaptive management refers to the “passive” approach. The ISAB (see ISAB 2011-4) and ISRP promote active adaptive management, consistent with the original definition of the term, in which experimentation is deliberate in order to reduce key uncertainties, with the goal of improving future decisions. This approach places a value on knowledge to reduce uncertainty in the future as an outcome in itself, and requires formulation of alternative hypotheses and an experimental design to test those hypotheses.

Evaluation of Results

This project first received funding in 2007, but the year of reconstruction of Red River Narrows was not mentioned. Significant changes in sinuosity and the presence of instream structure are evident in aerial photographs following reconstruction of two miles of channel in the Red River Narrows. However, it is not clear to what extent the reconstruction efforts have been successful according to the project's criteria. The limited temperature data were not helpful. Information on survival of plantings was more informative and indicates some success.

The extent to which Chinook and steelhead populations benefitted is also unclear and presumably unknown.

3. Project Relationships, Emerging Limiting Factors, and Tailored Questions

Collaboration with U.S. Forest Service staff stationed at the Nez Perce Clearwater National Forest is an important component of this project and the other three NPT restoration projects in the South Fork Clearwater River (Protect and Restore the Crooked River and American River Watersheds, Lower South Fork Clearwater River Watershed Restoration, and Newsome Creek Watershed Restoration) all of which share resources, personnel, and equipment with the Red River Watershed Restoration Project. Other projects that complement the Red River project are the Nez Perce Tribal Hatchery, IDFG’s Red River Satellite Fish Hatchery, NPT’s B-run Steelhead Supplementation Effectiveness Research, and NPT’s Clearwater River Subbasin Focus Watershed Program.

Two emerging limiting factors were identified: climate change and non-native species. The proposal includes some thoughtful consideration of how proposed actions could ameliorate predicted effects of climate change. Culvert and bridge crossings are designed to withstand 100-year floods. Removing passage barriers has been given a high priority to provide access to cool water refuges in higher portions of the watershed when needed. Riparian plantings and reconnections to the floodplain are expected to help dampen the effects of climate change and provide some cooling influence.

Invasive plants are currently not regarded as a significant problem in the Red River, but weed treatment is routine on project sites where ground disturbance has occurred. Interactions between native salmonids and brook trout were mentioned as another possible emerging limiting factor. Brook trout are euthanized whenever they are captured in the project area to reduce the likelihood of deleterious interactions.

4. Deliverables, Work Elements, Metrics, and Methods

The project has seven deliverables. Four of them are directed toward resolving limiting factors for salmon in the Red River subbasin. Three of these, riparian planting in Red River Meadows, stream and floodplain restoration, and road improvement and decommissioning are well defined. Deliverable 1 (Stream crossings replacements) needs further elaboration. An inventory of creek crossings was completed and several processes were used to identify 56 apparent barriers. How these barriers will be prioritized for replacement or removal is not presented.

The remaining three deliverables deal with project management, potential property acquisition, and action effectiveness monitoring.

The end points for objective one, "to increase anadromous fish productivity and production, and life stage specific survival through habitat improvement" need to be defined. Targets for survival and productivity should be stated and the rationale used to establish them explained. In short, a better justification is needed. That is, what is the overall plan?

Also note the ISRP's programmatic comments on the South Fork Clearwater projects and the Nez Perce Tribe's (NPT) plan for monitoring and evaluation. Those comments reflect concerns about: 1) how to achieve adequate status and trends monitoring given cessation of Idaho Supplementation Study in 2013, and uncertainty about initiation of CHaMP in this area, which would support inferences from ISEMP. 2) how to justify habitat restoration given that past obstruction by Lewiston and Harpster dams have reduced current abundances of Chinook and steelhead adults in the South Fork Clearwater River and its tributaries to levels that are likely too low, even with supplementation, for their reproduction and growth to be limited by the spawning and rearing habitat currently available in these watersheds. Justification for habitat restoration in these watersheds appears to rest on the conviction that adult abundances will increase to recolonize available habitat ("build it and they will come"). Such an increase seems plausible, but no compelling evidence was presented to indicate that it is likely.

The following qualifications are offered as advice to improve project design and monitoring, and should be addressed during contracting and subsequent proposals. No immediate response to the ISRP is required.

1. Purpose: Significance to Regional Programs, Technical Background, and Objectives

This proposal for the Red River along with ones for Newsome Creek, and Crooked and American Rivers is designed to restore habitat in the upper tributaries of the South Fork Clearwater River. The proposal includes a good summary of information relevant to the problems and limiting factors being addressed. Particularly helpful for this review were the concise summaries of the population units being targeted, their status, and their relationship to MPG and ESU viability assessments. The ISRP appreciates seeing consideration of Pacific lamprey and other trout species.

Two evaluations, the South Fork Clearwater Landscape Assessment and the Nez Perce Forest Plan, state that the South Fork and its upper tributaries have high potential for spring Chinook and steelhead production mainly due to topography and lack of development. Factors limiting the production of these species in the Red River were recently updated by the FCRPS BiOp Expert Panel Process and were also presented in the Red River Ecosystem Analysis at the Watershed Scale (EAWS). The limiting factors for Red River were identified as impaired channel complexity, elevated stream temperatures, passage barriers, and excessive sedimentation.

 Of the project’s nine objectives, eight address the limiting factors listed above, and four objectives, specifically reducing stream temperatures, reducing instream sedimentation, improving aquatic habitat diversity and complexity, and protecting and restoring riparian habitats list success criteria that can be measured. Desired end points for three others, removing anthropogenic barriers, restoring wetlands, and reducing the impact of existing roads, were not as fully developed. The end points for objective 1 (to increase anadromous fish productivity and production, and life stage specific survival through habitat improvement) still need to be defined. Targets for survival and productivity should be stated and the rationale used to establish them explained. Also, Objective 7 refers to Newsome Creek instead of Red River, which is presumably a typographic error.

2. History: Accomplishments, Results, and Adaptive Management (Evaluation of Results)

Approximately two miles of channel was reconstructed at the “Red River Narrows.” To complete this project, two acres of mine tailings were removed and the floodplain was re-graded to increase the width of the floodplain from 30 feet to over 100 feet. Stream sinuosity was also increased from 1.0 to 1.3, and three meander bends were added. Forty-one instream structures consisting of LWD, log jams, cobble fans, rock vanes, and other arrangements were added.

To reduce sedimentation, 43 miles of unneeded roads were decommissioned and 13 miles of roads were improved. Working with the U.S. Forest Service, five fish passage barriers have been replaced or removed, and an inventory of road crossings over streams in the Red River subbasin has been completed. Riparian zones have also been replanted. For example, in the Red River Narrows project area approximately 27,000 herbaceous plants of the 1 to 5-gallon size were planted along with 1,654 confers. In another restoration site, the Red River Meadows, approximately 26,000 ten to twenty cubic inch herbaceous and woody stock were planted along with 5,461 woody plants.

Onsite evaluations and results from monitoring programs are being used to adjust restoration approaches. Project monitoring allowed adaptive changes to the size of trees, shrubs, and herbaceous plants placed in riparian zones, and to the techniques used to plant them. Larger plants are being used, and they are now planted in terraced rows and protected by sod embankments. Culvert replacement has also changed since the project began. Bottomless culverts or bridges are used instead of typical squash pipe culverts so that flood level flows may pass without a large increase in velocity. Additionally, the sponsors are also installing control structures above, below, and in replacement culverts to reduce head cutting. Road decommissioning techniques have also evolved with fertilizer application to disturbed areas being discontinued in favor of pre- and post-weed treatment to reduce the presence of noxious weeds. Finally, changes in project direction and scope have occurred to meet the provisions of the FCRPS 2008 BiOp.

This proposal demonstrates that advice from the ISRP's review in 2006 has been taken seriously as the monitoring and adaptive management components of the proposal are much improved. However, the description of adaptive management refers to the “passive” approach. The ISAB (see ISAB 2011-4) and ISRP promote active adaptive management, consistent with the original definition of the term, in which experimentation is deliberate in order to reduce key uncertainties, with the goal of improving future decisions. This approach places a value on knowledge to reduce uncertainty in the future as an outcome in itself, and requires formulation of alternative hypotheses and an experimental design to test those hypotheses.

Evaluation of Results

This project first received funding in 2007, but the year of reconstruction of Red River Narrows was not mentioned. Significant changes in sinuosity and the presence of instream structure are evident in aerial photographs following reconstruction of two miles of channel in the Red River Narrows. However, it is not clear to what extent the reconstruction efforts have been successful according to the project's criteria. The limited temperature data were not helpful. Information on survival of plantings was more informative and indicates some success.

The extent to which Chinook and steelhead populations benefitted is also unclear and presumably unknown.

3. Project Relationships, Emerging Limiting Factors, and Tailored Questions

Collaboration with U.S. Forest Service staff stationed at the Nez Perce Clearwater National Forest is an important component of this project and the other three NPT restoration projects in the South Fork Clearwater River (Protect and Restore the Crooked River and American River Watersheds, Lower South Fork Clearwater River Watershed Restoration, and Newsome Creek Watershed Restoration) all of which share resources, personnel, and equipment with the Red River Watershed Restoration Project. Other projects that complement the Red River project are the Nez Perce Tribal Hatchery, IDFG’s Red River Satellite Fish Hatchery, NPT’s B-run Steelhead Supplementation Effectiveness Research, and NPT’s Clearwater River Subbasin Focus Watershed Program.

Two emerging limiting factors were identified: climate change and non-native species. The proposal includes some thoughtful consideration of how proposed actions could ameliorate predicted effects of climate change. Culvert and bridge crossings are designed to withstand 100-year floods. Removing passage barriers has been given a high priority to provide access to cool water refuges in higher portions of the watershed when needed. Riparian plantings and reconnections to the floodplain are expected to help dampen the effects of climate change and provide some cooling influence.

Invasive plants are currently not regarded as a significant problem in the Red River, but weed treatment is routine on project sites where ground disturbance has occurred. Interactions between native salmonids and brook trout were mentioned as another possible emerging limiting factor. Brook trout are euthanized whenever they are captured in the project area to reduce the likelihood of deleterious interactions.

4. Deliverables, Work Elements, Metrics, and Methods

The project has seven deliverables. Four of them are directed toward resolving limiting factors for salmon in the Red River subbasin. Three of these, riparian planting in Red River Meadows, stream and floodplain restoration, and road improvement and decommissioning are well defined. Deliverable 1 (Stream crossings replacements) needs further elaboration. An inventory of creek crossings was completed and several processes were used to identify 56 apparent barriers. How these barriers will be prioritized for replacement or removal is not presented.

The remaining three deliverables deal with project management, potential property acquisition, and action effectiveness monitoring.

Modified by Dal Marsters on 6/11/2013 3:34:16 PM.

1. Purpose: Significance to Regional Programs, Technical Background, and Objectives

This proposal for Newsome Creek, along with those for the Red River, and Crooked and American Rivers, is designed to restore habitat in the upper tributaries of the South Fork Clearwater River. The proposal includes a good summary of information relevant to the problems and limiting factors being addressed. Particularly helpful for this review were the concise summaries of the population units being targeted, their status, and their relationship to MPG and ESU viability assessments. The ISRP appreciated seeing consideration of Pacific lamprey and other trout species.

The objectives of the proposed work are clearly significant to regional programs. Two evaluations, the South Fork Clearwater Landscape Assessment and the Nez Perce Forest Plan, state that the South Fork and its upper tributaries have high potential for spring Chinook and steelhead production, mainly due to topography and lack of human development. Factors limiting the production of these species in Newsome Creek were recently updated by the FCRPS BiOp Expert Panel Process and presented in the Newsome Creek Ecosystem Analysis at the Watershed Scale (EAWS). The primary limiting factors are impacts caused by instream mining and dredge tailing placement, sedimentation due to roads, and fish passage barriers.

Of the project’s nine objectives, eight address the limiting factors listed above, and six explicitly list success criteria that can be measured. Desired end points for three other objectives, removing anthropogenic barriers, restoring wetlands, and reducing the impact of existing roads, were quantitative but not as fully developed. Criteria for Objectives 3 and 4 need continued refinement to tie them more directly to fish production in the project area. Also note that for Objective 4 there is a discrepancy between the success criterion in the objective (<20% cobble embeddedness) and the goal stated in the Results on page 12 (<30% cobble embeddedness). It remains unclear how the embeddedness criterion was developed.

The section on the proposed monitoring plan (pages 7-8) is well organized and helpful. The proposed case study for action effectiveness monitoring following mine tailing reclamation and stream reconstruction is good to see.

2. History: Accomplishments, Results, and Adaptive Management (Evaluation of Results)

The Newsome Creek Restoration project was planned as two phases. The goal of Phase One was to restore approximately 4 miles of stream in the upper watershed. So far, 2.25 miles of the stream has been restored, 106 LWD structures were added to the stream, and over 44,000 cubic yards of dredge mining tailings were removed. Two new meanders and five new side channels were constructed. The project also decommissioned 26 miles of unneeded roads and improved an additional 18 miles of roads to reduce instream sedimentation. An inventory of all the road crossings in the Newsome Creek project area was completed and passage barriers were prioritized. The two highest rated barriers, one at Mare Creek and another at Mule Creek, were corrected to open up six miles of habitat for anadromous salmonids. Phase Two will address 7 miles of channel from the town site downstream to the confluence with the South Fork Clearwater River.

This proposal demonstrates that advice from the ISRP's review in 2006 has been taken seriously as the monitoring and adaptive management components of the proposal are much improved. Personnel involved with this project were also monitoring and evaluating restoration projects in other parts of the South Fork Clearwater. Lessons learned there have helped to refine how new restoration work occurs in Newsome Creek. For example, tactics for placing large woody debris have changed from placing logs as point features to placing logs throughout the entire restored portion of the stream. The approach for removing and using mine tailings has also been adjusted. Initially, some tailings were to be left in the floodplain, but this plan was modified in favor of complete removal in order to restore the entire valley bottom.

An important statement is also made regarding this adaptive management: "Being able to use immediate adaptive management on this project has been a huge benefit, and has taken a 'ho-hum' conservative design with a high safety factor into a dynamic, connected stream system that has seen immediate benefits (which are discussed in the results section)." This is an excellent observation and a reminder to all involved, including reviewers, regarding the value of being able to think outside the usual guidelines to make adjustments.

It should be noted, however, that the description of adaptive management in the proposal implies a passive approach whereas the ISAB (see ISAB 2011-4) and ISRP promote active adaptive management. In the original definition of the term, adaptive management involves deliberate experimentation to reduce key uncertainties, with the goal of improving future decisions. This active approach places a value on knowledge to reduce uncertainty in the future as an outcome in itself and requires formulation of alternative hypotheses and an experimental design to test those hypotheses.

Evaluation of Results

This project first received funding in 2011 and has a strong performance record to date.

Phase One restoration of 2.25 miles of Newsome Creek, together with the obliteration of 26 miles of unneeded roads and improvement of 18 miles of remaining roads, has significantly decreased instream embeddedness and increased in pool depth. These rapid improvements are attributed primarily to modified flow due to the addition of LWD.

Floodplain area within the Phase One restoration site has been increased by 45%. Note that the EWAS grossly underestimated the quantity of dredge tailings in the watershed.

Removal of the two highest-priority barriers has opened up six miles of new habitat for anadromous fishes.

3. Project Relationships, Emerging Limiting Factors, and Tailored Questions

Collaboration with U.S. Forest Service staff stationed at the Nez Perce Clearwater National Forest is an important component of this project and the other three NPT restoration projects in the South Fork Clearwater River (Protect and Restore the Crooked River and American River Watersheds, Lower South Fork Clearwater River Watershed Restoration, and Red River Watershed Restoration) all of which share resources, personnel, and equipment with the Newsome Creek Watershed Restoration Project. Other projects that complement the Newsome Creek project are: The Nez Perce Tribal Hatchery, IDFG’s Red River Satellite Fish Hatchery, NPT’s B-run Steelhead Supplementation Effectiveness Research, and NPT’s Clearwater River Subbasin Focus Watershed Program.

Two emerging limiting factors, climate change and non-native species, were identified. The proposal includes some thoughtful consideration of how proposed actions could ameliorate predicted effects of climate change. Culvert and bridge crossings are designed to withstand 100-year floods. Removing passage barriers has been given a high priority to provide access to cool water refuges in higher portions of the watershed when needed. Riparian plantings and reconnections to the floodplain are expected to help dampen the effects of climate change and provide some cooling influence.

Invasive plants are currently not regarded as a significant problem in Newsome Creek, but weed treatment is routine on project sites where ground disturbance has occurred. Interactions between native salmonids and brook trout were mentioned as another possible emerging limiting factor. Brook trout are euthanized whenever they are captured in the project area to reduce the likelihood of deleterious interactions.

4. Deliverables, Work Elements, Metrics, and Methods

The project has six well-defined deliverables. The first deliverable, for example is to restore the Newsome Creek stream channel. To accomplish this, the sponsors will remove approximately 104,000 cubic yards of mine tailings, create at least five new meanders and side channels plus add LWD. Other deliverables are to re-vegetate riparian areas; decommission and improve roads, replace stream crossings that may interfere with fish passage, and perform effectiveness monitoring using the “Action Effectiveness of Tributary Habitat Improvement: a Programmatic Approach for the Columbia River Basin Fish and Wildlife Program” recently developed by Phil Roni and colleagues. The sponsors are currently working with Roni and other NOAA-Fisheries personnel to develop a monitoring plan specifically for Newsome Creek.

===========QUALIFICATIONS FOLLOW================

This strong proposal represents a significant move forward by explicitly integrating fish metrics into the objectives for habitat rehabilitation. The following qualifications are offered as advice to improve project design and monitoring, and should be addressed during contracting and subsequent proposals. No immediate response to the ISRP is required.

Note the ISRP's programmatic comments on the South Fork Clearwater projects and the NPT M&E Plan. Those comments reflect concerns about:

How to achieve adequate status and trends monitoring given cessation of Idaho Supplementation Study in 2013, and uncertainty about initiation of CHaMP in this area, which would support inferences from ISEMP.

How to justify habitat restoration given that past obstructions by Lewiston and Harpster dams have reduced current abundances of Chinook and steelhead adults in the South Fork Clearwater River and its tributaries to levels that are likely too low, even with supplementation, for their reproduction and growth to be limited by the spawning and rearing habitat currently available in these watersheds. Justification for habitat restoration in these watersheds appears to rest on the conviction that adult abundances will increase to recolonize available habitat ("build it and they will come"). Such an increase seems plausible, but no compelling evidence was presented to indicate that it is likely.

1. Purpose: Significance to Regional Programs, Technical Background, and Objectives

This proposal for Newsome Creek, along with those for the Red River, and Crooked and American Rivers, is designed to restore habitat in the upper tributaries of the South Fork Clearwater River. The proposal includes a good summary of information relevant to the problems and limiting factors being addressed. Particularly helpful for this review were the concise summaries of the population units being targeted, their status, and their relationship to MPG and ESU viability assessments. The ISRP appreciated seeing consideration of Pacific lamprey and other trout species.

The objectives of the proposed work are clearly significant to regional programs. Two evaluations, the South Fork Clearwater Landscape Assessment and the Nez Perce Forest Plan, state that the South Fork and its upper tributaries have high potential for spring Chinook and steelhead production, mainly due to topography and lack of human development. Factors limiting the production of these species in Newsome Creek were recently updated by the FCRPS BiOp Expert Panel Process and presented in the Newsome Creek Ecosystem Analysis at the Watershed Scale (EAWS). The primary limiting factors are impacts caused by instream mining and dredge tailing placement, sedimentation due to roads, and fish passage barriers.

Of the project’s nine objectives, eight address the limiting factors listed above, and six explicitly list success criteria that can be measured. Desired end points for three other objectives, removing anthropogenic barriers, restoring wetlands, and reducing the impact of existing roads, were quantitative but not as fully developed. Criteria for Objectives 3 and 4 need continued refinement to tie them more directly to fish production in the project area. Also note that for Objective 4 there is a discrepancy between the success criterion in the objective (<20% cobble embeddedness) and the goal stated in the Results on page 12 (<30% cobble embeddedness). It remains unclear how the embeddedness criterion was developed.

The section on the proposed monitoring plan (pages 7-8) is well organized and helpful. The proposed case study for action effectiveness monitoring following mine tailing reclamation and stream reconstruction is good to see.

2. History: Accomplishments, Results, and Adaptive Management (Evaluation of Results)

The Newsome Creek Restoration project was planned as two phases. The goal of Phase One was to restore approximately 4 miles of stream in the upper watershed. So far, 2.25 miles of the stream has been restored, 106 LWD structures were added to the stream, and over 44,000 cubic yards of dredge mining tailings were removed. Two new meanders and five new side channels were constructed. The project also decommissioned 26 miles of unneeded roads and improved an additional 18 miles of roads to reduce instream sedimentation. An inventory of all the road crossings in the Newsome Creek project area was completed and passage barriers were prioritized. The two highest rated barriers, one at Mare Creek and another at Mule Creek, were corrected to open up six miles of habitat for anadromous salmonids. Phase Two will address 7 miles of channel from the town site downstream to the confluence with the South Fork Clearwater River.

This proposal demonstrates that advice from the ISRP's review in 2006 has been taken seriously as the monitoring and adaptive management components of the proposal are much improved. Personnel involved with this project were also monitoring and evaluating restoration projects in other parts of the South Fork Clearwater. Lessons learned there have helped to refine how new restoration work occurs in Newsome Creek. For example, tactics for placing large woody debris have changed from placing logs as point features to placing logs throughout the entire restored portion of the stream. The approach for removing and using mine tailings has also been adjusted. Initially, some tailings were to be left in the floodplain, but this plan was modified in favor of complete removal in order to restore the entire valley bottom.

An important statement is also made regarding this adaptive management: "Being able to use immediate adaptive management on this project has been a huge benefit, and has taken a 'ho-hum' conservative design with a high safety factor into a dynamic, connected stream system that has seen immediate benefits (which are discussed in the results section)." This is an excellent observation and a reminder to all involved, including reviewers, regarding the value of being able to think outside the usual guidelines to make adjustments.

It should be noted, however, that the description of adaptive management in the proposal implies a passive approach whereas the ISAB (see ISAB 2011-4) and ISRP promote active adaptive management. In the original definition of the term, adaptive management involves deliberate experimentation to reduce key uncertainties, with the goal of improving future decisions. This active approach places a value on knowledge to reduce uncertainty in the future as an outcome in itself and requires formulation of alternative hypotheses and an experimental design to test those hypotheses.

Evaluation of Results

This project first received funding in 2011 and has a strong performance record to date.

Phase One restoration of 2.25 miles of Newsome Creek, together with the obliteration of 26 miles of unneeded roads and improvement of 18 miles of remaining roads, has significantly decreased instream embeddedness and increased in pool depth. These rapid improvements are attributed primarily to modified flow due to the addition of LWD.

Floodplain area within the Phase One restoration site has been increased by 45%. Note that the EWAS grossly underestimated the quantity of dredge tailings in the watershed.

Removal of the two highest-priority barriers has opened up six miles of new habitat for anadromous fishes.

3. Project Relationships, Emerging Limiting Factors, and Tailored Questions

Collaboration with U.S. Forest Service staff stationed at the Nez Perce Clearwater National Forest is an important component of this project and the other three NPT restoration projects in the South Fork Clearwater River (Protect and Restore the Crooked River and American River Watersheds, Lower South Fork Clearwater River Watershed Restoration, and Red River Watershed Restoration) all of which share resources, personnel, and equipment with the Newsome Creek Watershed Restoration Project. Other projects that complement the Newsome Creek project are: The Nez Perce Tribal Hatchery, IDFG’s Red River Satellite Fish Hatchery, NPT’s B-run Steelhead Supplementation Effectiveness Research, and NPT’s Clearwater River Subbasin Focus Watershed Program.

Two emerging limiting factors, climate change and non-native species, were identified. The proposal includes some thoughtful consideration of how proposed actions could ameliorate predicted effects of climate change. Culvert and bridge crossings are designed to withstand 100-year floods. Removing passage barriers has been given a high priority to provide access to cool water refuges in higher portions of the watershed when needed. Riparian plantings and reconnections to the floodplain are expected to help dampen the effects of climate change and provide some cooling influence.

Invasive plants are currently not regarded as a significant problem in Newsome Creek, but weed treatment is routine on project sites where ground disturbance has occurred. Interactions between native salmonids and brook trout were mentioned as another possible emerging limiting factor. Brook trout are euthanized whenever they are captured in the project area to reduce the likelihood of deleterious interactions.

4. Deliverables, Work Elements, Metrics, and Methods

The project has six well-defined deliverables. The first deliverable, for example is to restore the Newsome Creek stream channel. To accomplish this, the sponsors will remove approximately 104,000 cubic yards of mine tailings, create at least five new meanders and side channels plus add LWD. Other deliverables are to re-vegetate riparian areas; decommission and improve roads, replace stream crossings that may interfere with fish passage, and perform effectiveness monitoring using the “Action Effectiveness of Tributary Habitat Improvement: a Programmatic Approach for the Columbia River Basin Fish and Wildlife Program” recently developed by Phil Roni and colleagues. The sponsors are currently working with Roni and other NOAA-Fisheries personnel to develop a monitoring plan specifically for Newsome Creek.

===========QUALIFICATIONS FOLLOW================

This strong proposal represents a significant move forward by explicitly integrating fish metrics into the objectives for habitat rehabilitation. The following qualifications are offered as advice to improve project design and monitoring, and should be addressed during contracting and subsequent proposals. No immediate response to the ISRP is required.

Note the ISRP's programmatic comments on the South Fork Clearwater projects and the NPT M&E Plan. Those comments reflect concerns about:

Modified by Dal Marsters on 6/11/2013 11:45:32 AM.

The funding qualifications are (1) that actions to stabilize stream banks are fundable only if the bank reinforcements are done by planting vegetation, installing simulations of naturally lodged wood debris, or bioengineering methods that will eventually allow natural rates of channel migration, i.e., funding for hard-engineered structures, such as ones built primarily of rock is not justified, and (2) preparation of an appropriate, clearly organized and well-designed monitoring and evaluation plan must be done for this project.

The project's purpose is to protect and restore Red River habitat for fish. The sponsors take a watershed approach. It includes work to treat upland, riparian, and instream problems. In particular, actions will protect existing productive riparian habitats from human disturbance and development. Protection and restoration are needed with respect to damage caused by such human activities as urbanization, livestock grazing, mining, road building, logging, channelization, agricultural activities, and even recreation. Much of the proposed actions involve road improvement and decommissioning to reduce stream sedimentation and culvert replacement to remove fish migration barriers. The focal species are Chinook salmon, steelhead, and Pacific lamprey. The secondary species include four other salmonids and mountain whitefish. Other animals expected to benefit include moose, elk, and deer.

Upon receiving ISRP review comments, the sponsors discovered they had mistakenly included the 2002 Provincial Review Narrative in their proposal submission instead of the 2007 version. This complication resulted in various ISRP comments that are no longer applicable. We have tried to disentangle them from the extensive re-review that was needed.

The ISRP called for Ecosystem Analysis at the Watershed Scale (EAWS). The response clarifies that this analysis was done in 2002, and how the project plan relates to it. The project's emphasis is on roads and road rehabilitation, but the value of improved aquatic habitat is clearly recognized in the proposal.

The sponsors also noted that this proposal is tied to other important initiatives within the subbasin and the Columbia Basin. Significance to the subbasin plan is adequately shown, as are relationships to other projects.

The ISRP commented that, because funding actually began in 2002, a response was needed which includes a more thorough and quantitative summary of results produced to date. The correct narrative and the response document provide a more quantitative summary of the project's accomplishments to date. These are mainly statements of actions performed, and, of course, many physical and most biological results may not be detectable until more years have passed.

The long list of work elements and methods in Section F was not organized in hierarchical fashion to show how the elements related. Organization of work elements by objective exists in that section's table. The table is a useful supplement but does not substitute for narrative text, which would be more informative. This proposal, like several others did not bother to incorporate much narrative into Section F (objectives, work elements and methods). This made it hard to know in many respects what is actually planned for the methods.

The ISRP is concerned that the project's plans for in-channel restructuring may focus too much on rock work (boulders). Emphasis on "softer" forms of soil bioengineering using live, flexible woody vegetation in combination with root wads and other wood "debris" is recommended. The proposal's statement, "working to stabilize stream banks and create pools," conveys good intent but is much too vague. Inappropriate techniques of bank stabilization would harm fish habitat. The use of such hard-engineered structures as rock riprap and rock "vanes" or "J-hooks" (not specified in this proposal but implied or at least not ruled out) would not be justifiable, given the evidence provided. Qualification is placed on the funding recommendation partly for this reason.

The ISRP suggests that choice of technique depends greatly upon the quality of the fluvial geomorphologic analysis, which should address whether the stream is stable, incising, or aggrading. Only when the dynamic state of the stream is known can structural work be confidently proposed with the understanding that it is unlikely to become scoured out or buried in sediment.

The project's M&E plan still needs to be organized as such and presented in detail. In the present ("correct" 2007) narrative, the probable M&E elements are still scattered among the unorganized list of work elements. This is a major deficiency, which accounts for another part of the recommended funding qualification.

The ISRP recommended that, in the response loop, the Nez Perce Tribe prioritize and rank the numerous proposals submitted under "protect and restore" titles. This was covered in response attachments. For full comments on "restore and protect" type projects, please see heading "General comments concerning Nez Perce Tribe proposals to protect and restore various watersheds" at the beginning of the ISRP comments on project # 199607702, Protect & Restore Lolo Creek Watershed.

The qualification is that the sponsors carry out a genuine geomorphic analysis to ensure the effectiveness of their instream work (see item 4, below).

The purpose of this project is to restore stream fish habitat from damage cause by human activities, mainly upland and riparian road building, excessive timber harvest, and mining. Proposed actions include reducing sediment input from roads, rehabilitating channel reaches damaged by dredge mining, and replacing culverts to allow fish passage. The focal species are Chinook salmon, Pacific lamprey, and steelhead. Non-focal species include bull, redband, westslope cutthroat and rainbow trout, as well as mountain whitefish. This project will benefit the focal species and non-focal species.

This proposal is well written and reasonably thorough. It contains comprehensive description of the problems. Significance to the subbasin plan and relationships to other projects are adequately shown. The ISRP asked the sponsors to respond on the following:

(1) The project history listed actions performed but did not present evidence of physical and biological results. Some data were presented in an appendix (not referred to in the project history), but without narrative interpretation, it was not always clear whether they represented benefits from the project's restorative efforts. The sponsors responded that the appendix data came only from pre-construction measurements in 2003 for project planning purposes. The only management completed to date is six miles of road decommissioning. Thus, little of the planned restoration work has been done, and no results exist. The sponsors are collecting more pre-restoration data.

(2) The project's objectives apparently came verbatim from the subbasin plan. They were arranged in no logical sequence but seemed to cover the problems. The long list of work elements and methods in Section F was not organized in hierarchical fashion to show how the elements related. The sponsors responded by pointing out that the organization of work elements by objective is better seen in that section's tables. The tables usefully supplement but do not substitute for narrative text, which needs to be more informative. This proposal, like several others did not incorporate much narrative into Section F (objectives, work elements and methods). This made it hard to know in many respects what is actually planned for the methods. The next problem relates to this.

(3) Some of the descriptions of methods were vague. For example, under work element 13, it was not said what would be done to increase "stream habitat complexity" (a vague concept—what are the units of complexity?). The sponsors stated they plan to modify instream structures built in the 1980s-1990s to bring them up to "today's design standards." The ISRP asked for descriptions of the structures involved, explanation of what is wrong with them, and descriptions of the new designs and how they will benefit fish. The sponsors responded that habitat complexity would involve "restructuring several reaches of the 4 mile section of mainstem Newsome Creek," that a feasibility study gave detailed reach drawings of conceptual channel alignment and tables on "what type and how many habitat units will be constructed." They included some of drawings in the response document.

The sponsors, in explaining why they feel some earlier artificial structures should be replaced, may reveal some misunderstanding about stream form and fish habitat. They say with respect to log structures that were placed perpendicular in the stream (and which create scours on the stream banks) that "today's design standards would put them more at a natural angle, therefore reducing bank scour." The ISRP points out that perpendicularity of logs to the stream course is not necessarily unnatural (logs can fall that way in nature) and need not cause bank erosion if suitably installed. Logs placed at some other angles can indeed have more beneficial effects than perpendicular installations, including diversion of current toward a stream bank to form a scour pool and undercut bank where fish will find shelter with drifting food within close reach.

The sponsors failed to respond on the question of how their work would benefit fish. They could have responded with information such as is shown in the last sentence in the preceding paragraph. However, the response information shows in general, by drawing on referenced documents, greater cognizance of fish habitat characteristics than the original proposal did. It includes a table showing intended quantifiable changes in physical parameters of the channel but does not indicate how this relates to fish.

(4) The ISRP asked that the response give detailed attention to geomorphic analysis of reaches affected by the mining, including the impacts of headward incision (disconnection of stream from floodplain, for example). The ISRP commented that it is imperative that the proposal incorporate these considerations. The sponsors responded that a major part of their feasibility study was "geomorphic analysis, including past, present, and the desired (as close to historic as possible) geomorphology of the stream," that the study analyzed current geomorphology of the stream in detail, and that "the final design for the stream rehabilitation will incorporate geomorphic analysis and potential impacts of headward incision as well as other issues such as sedimentation, gradient, sinuosity, etc."

This response indicates that the sponsors' understanding of geomorphic analysis is the past, present and desired future shape of the stream - in effect, three "snapshots." However, the analysis should include assessment of the dynamic changes taking place--incision or aggradation, for example. Unless the stream is assessed in this way, it is unlikely that the sponsors will know whether their proposed works will be scoured out or buried within a few years. The ISRP recommends the qualification that the sponsors will carry out a geomorphic analysis to ensure the effectiveness (including cost-effectiveness) of their instream work.

(5) The statistical design of the sampling and analysis involved in project monitoring and evaluation (M&E) (work elements 18 through 21) was missing. The proposed M&E was presented largely as a listing, rather than as a synthesized approach to identifying what is needed and describing how to measure it. The ISRP asked that this deficiency be corrected in a response. The response indicated that a more detailed M&E plan is being developed between agencies via consultation. It noted that this project was not designed to have extensive M&E, but rather to collect enough M&E data to evaluate project compliance and effectiveness.

(6) The ISRP recommended that, in the response loop, the Nez Perce Tribe prioritize and rank the numerous proposals submitted under "protect and restore" titles. This was covered in response attachments.

For full comments on "restore and protect" type projects, please see heading "General comments concerning Nez Perce Tribe proposals to protect and restore various watersheds" at the beginning of the ISRP comments on project # 199607702, Protect & Restore Lolo Creek Watershed.