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Archive | Date | Time | Type | From | To | By |
9/15/2011 | 10:26 AM | Status | Draft | <System> | ||
Download | 11/29/2011 | 2:11 PM | Status | Draft | ISRP - Pending First Review | <System> |
2/16/2012 | 1:28 PM | Status | ISRP - Pending First Review | ISRP - Pending Final Review | <System> | |
4/13/2012 | 12:31 PM | Status | ISRP - Pending Final Review | Pending Council Recommendation | <System> | |
2/26/2014 | 11:40 AM | Status | Pending Council Recommendation | Pending BPA Response | <System> |
Proposal Number:
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RESCAT-1990-044-00 | |
Proposal Status:
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Pending BPA Response | |
Proposal Version:
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Proposal Version 1 | |
Review:
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Resident Fish, Regional Coordination, and Data Management Category Review | |
Portfolio:
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Resident Fish, Regional Coordination, and Data Management Categorical Review | |
Type:
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Existing Project: 1990-044-00 | |
Primary Contact:
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Angelo Vitale | |
Created:
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9/15/2011 by (Not yet saved) | |
Proponent Organizations:
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Coeur D'Alene Tribe |
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Project Title:
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Coeur D'Alene Subbasin Fisheries Restoration and Enhancement | |
Proposal Short Description:
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This is an ongoing project designed to address the highest priority objective in the Coeur d’Alene Subbasin: to protect and restore remaining stocks of native resident westslope cutthroat trout to ensure their continued existence in the basin and provide harvestable surpluses of naturally reproducing adfluvial adult fish. The objectives are tiered to the Intermountain Province objectives and to the Columbia River Basin goal that addresses resident fish substitution for anadromous fish losses. | |
Proposal Executive Summary:
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This is an ongoing project designed to address the highest priority objective in the Coeur d’Alene Subbasin: to protect and restore remaining stocks of native resident westslope cutthroat trout (Oncorhynchus clarki lewisi) to ensure their continued existence in the basin and provide harvestable surpluses of naturally reproducing adfluvial adult fish in Lake Coeur d'Alene and in Lake and Benewah creeks, with stable or increasing population trends for resident life history types in Evans and Alder creeks. The project objectives are tiered to the Intermountain Province Objectives 2A1-2A4 and to the Columbia River Basin Goal 2A that addresses resident fish substitution for anadromous fish losses (Intermountain Province Subbasin Plan 2004). Project objectives are: 1) improve stream habitats; 2) track trends in salmonid demographics and population structure; 3) evaluate effectiveness of habitat restoration; 4) address impacts from non-native introduced fishes; and 5) increase cooperation and coordination among stakeholders. The management approach being applied is based on identifying and protecting core refugia and expanding restoration outward from areas of relatively intact habitats and populations, coupled with an analytical approach to prioritizing actions based on the degree of impairment to processes operating at the scale of species and ecosystems and the rarity of specific habitat types. Habitat restoration and enhancement activities employ the seven highest ranked strategies for addressing this objective within the Subbasin. Since 2004, 6.8 km of habitats have been made accessible through removal of passage barriers, 457 m of stream habitats have been treated with additions of coarse wood, and 6.2 km of degraded mainstem and tributary habitats and 20.3 hectares of associated floodplain have been treated through large scale channel restoration. In treated areas, we have increased channel length, pool habitats, and wood frequency and volume. Restoration efforts have significantly improved stream bank conditions to reduce erosion potential and reconnected streams to their floodplains. Temperature monitoring in mainstem reaches have revealed the creation of thermal refugia that were the results of our activities. Although we have yet to see direct evidence of a significant response by cutthroat trout, we observed more pronounced positive trajectories in abundance in tributaries of Benewah Creek compared to the watersheds that have received less management intervention in recent years. This may have been a collective response to the large-scale habitat restoration and the aggressive brook trout suppression program that have proceeded since 2004. As additional years of data are collected, further comparisons among watersheds will allow us to better evaluate whether population responses are the result of our remedial actions. Recently we used watershed assessments and long-term monitoring data as the basis for developing and ranking additional habitat projects to address watershed process impairment for sediment, flood hydrology, riparian and channel function and water quality. The resulting list of projects will be used to negotiate landowner agreements for implementation, and serves as the core of on-the-ground work that is identified in this proposal. Implementation will support recovery of resident and migratory westslope cutthroat trout through restoration and enhancement of landscape processes that form and sustain riverine habitat diversity. We propose to treat 15 km of channel with large wood additions to improve habitat diversity, sediment storage, grade control, habitat cover, and connectivity with floodplains. Riparian habitats associated with 12.7 km of channel are targeted for treatment to restore and/or conserve stream adjacent forests to provide natural recruitment of coarse woody debris over time. Some 19 km of forest roads are targeted for BMP’s to reduce sediment delivery to important spawning and rearing habitats. Finally, 28 barriers are targeted to improve fish passage and open access to 28.3 km of stream habitats. We propose to implement these projects in prioritized sub-watersheds using a hierarchical and/or staircase design within the constraints dictated by landownership. This approach results in multiple treatment replicates at different temporal and spatial scales. Treatments may be applied in a pulsed manner over a 5-10 year period so that some reaches may serve as temporary controls. Specific reaches will also likely remain untreated and serve as permanent controls within each sub-watershed. In this manner, habitat and biological metrics will be examined and compared between treated and control reaches to evaluate local responses to the treatments. As more reaches are treated, biological responses will be examined and compared at larger scales. It is imperative that we have the capability to reliably track temporal changes in adfluvial spawners given that one of the primary objectives of our recovery efforts is to augment the number of returning adult cutthroat to our watersheds. Trapping modifications made during the last proposal cycle likely explain the greater numbers of adult cutthroat captured in Lake and Benewah creeks in more recent years and the consistency in trapping efforts. Because of the increased number of adults captured in our traps, we were able to obtain a sufficient sample size to initiate a mark-recapture program to estimate spawner abundance beginning in 2009. The ability to obtain rather precise estimates of annual adult abundance should permit us to reliably assess the status of adfluvial spawners in our watersheds and track trends in this high-level indicator over time. Our program also tracks adfluvial juvenile production in Lake and Benewah creek watersheds. Juvenile outmigrant abundance estimates and associated age structure information will permit the derivation of outmigrant per spawner ratios, a watershed-wide indicator that would allow tracking of trajectories in juvenile production in addition to aiding in the assessment of in-stream population response to our restoration actions. Our monitoring program has also conducted population surveys at established index sites distributed across tributary and mainstem reaches to evaluate cutthroat trout abundance trends at a much finer spatial scale than that attainable using our migrant trap data. Trend trajectories permit an examination of whether conditions appear to be improving or declining at local tributary, watershed, and regional scales. Trend monitoring also permits a description of temporal changes in spatial distributions to assess expansion rates of cutthroat trout populations to examine whether newly created suitable habitat is undergoing colonization. Index site abundance data collected from 2003 to 2009 revealed the presence of temporal trends in age one and older cutthroat trout in our monitored watersheds, though the abundance trajectories varied among systems. We will continue these monitoring efforts during this proposal cycle. Furthermore, we propose to refine the PIT-tagging program we began in 2006 by using half-duplex technology to examine fine-scale movements and utilization of restored habitats by cutthroat trout to describe action effectiveness in a more cost-effective manner. We initiated a brook trout control program in 2004 in the upper portion of the Benewah watershed to offset unintended benefits of restoration actions for this non-native species and create recruitment bottlenecks at other vital life stages. Our approach was tempered by the desire to maintain connectivity with the lake to promote the migratory life-history variant of our cutthroat trout population and its concomitant high productivity potential. Initially, our control strategy entailed annually removing fish before fall spawning periods by conducting single-pass electrofishing efforts through contiguous mainstem reaches and in tributaries that supported relatively high densities of brook trout. Numerical responses in brook trout to our efforts were examined at index sites throughout the upper watershed. More recently, our suppression approach has refocused tactics toward curbing reproductive success by inhibiting access to suitable spawning habitats through installation of temporary barriers and curtailing shocking efforts to a 2 km mainstem reach where adult densities have been found to be the greatest. If these methods prove successful, we will seek to further reduce the frequency at which we conduct our suppression measures. Given that recent PIT-tag data suggest that adfluvial juvenile-to-spawner return rates are exceptionally low in our monitored systems, we are placing a stronger emphasis on understanding the processes and mechanisms that are impacting the suitability of rearing habitats in Lake Coeur d’Alene. As an initial step toward this management goal, a collaborative study with the University of Idaho is currently underway to better understand whether predation by northern pike and smallmouth bass is a predominant mechanism regulating juvenile in-lake survival rates. Demographic and dietary data is being collected from both predators during repeated sampling efforts and incorporated into bioenergetic models to estimate the consumption of cutthroat trout. The study will conclude in 2013 and information gained will support the development of actions to reduce this source of mortality. These efforts reflect an understanding gained through project monitoring, that limiting factors in stream environments and the lake must be collectively addressed to recover adfluvial cutthroat trout populations. Implementing actions in the lake to improve juvenile return rates should provide the spawners necessary to seed restored stream habitats and increase in-stream production. |
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Purpose:
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Habitat | |
Emphasis:
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Restoration/Protection | |
Species Benefit:
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Anadromous: 0.0% Resident: 100.0% Wildlife: 0.0% | |
Supports 2009 NPCC Program:
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Yes | |
Subbasin Plan:
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Fish Accords:
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None | |
Biological Opinions:
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None |
The BPA project 1990-044-00, entitled “Coeur d'Alene Sbubasin Fisheries Restoration and Enhancement”, mitigates for lost fishery resources that are of cultural significance to the Coeur d’Alene Tribe. This project funds management actions, and research, monitoring, and evaluation (RME) activities associated with these actions, which are carried out by the Coeur d’Alene Tribe’s Fisheries Program to recover populations of westslope cutthroat trout in the Coeur d’Alene basin.
Historically, the Coeur d’Alene Indian Tribe depended on runs of anadromous salmon and steelhead along the Spokane River and Hangman Creek as well as resident and adfluvial forms of trout and char in Coeur d’Alene Lake for subsistence. Dams constructed in the early 1900s on the Spokane River in the City of Spokane and at Little Falls (further downstream) were the first dams that initially cut-off the anadromous fish runs from the Coeur d’Alene Tribe. These fisheries were further removed following the construction of Chief Joseph and Grand Coulee Dams on the Columbia River. Together, these actions forced the Tribe to rely solely on the resident fish resources of Coeur d’Alene Lake for their subsistence needs. The Coeur d’Alene Tribe is estimated to have historically harvested around 42,000 westslope cutthroat trout (Oncorhynchus clarki lewisi) per year (Scholz et al. 1985). In 1967, Mallet (1969) reported that 3,329 cutthroat trout were harvested from the St. Joe River, and a catch of 887 was reported from Coeur d’Alene Lake. This catch is far less than the 42,000 fish per year the tribe harvested historically. Today, only limited opportunities exist to harvest cutthroat trout in the Coeur d’Alene Basin. It appears that a suite of factors have contributed to the decline of cutthroat trout stocks within Coeur d'Alene Lake and its tributaries (Mallet 1969; Scholz et al. 1985; Lillengreen et al. 1993). These factors included the construction of Post Falls Dam in 1906, major changes in land cover types, impacts from agricultural activities, and introduction of exotic fish species.
The decline in native cutthroat trout populations in the Coeur d'Alene basin has been a primary focus of study by the Coeur d'Alene Tribe's Fisheries Program since 1990. The overarching goals for recovery have been to restore the cutthroat trout populations to levels that allow for subsistence harvest, maintain genetic diversity, and increase the probability of persistence in the face of anthropogenic influences and prospective climate change. This includes recovering the lacustrine-adfluvial life history form that was historically prevalent and had served to provide resilience to the structure of cutthroat trout populations in the Coeur d'Alene basin. To this end, the Coeur d’Alene Tribe closed Lake Creek and Benewah Creek to fishing in 1993 to initiate recovery of westslope cutthroat trout to historical levels. In 1994, the Northwest Power Planning Council adopted the recommendations set forth by the Coeur d'Alene Tribe to improve the Reservation fishery (NWPPC Program Measures 10.8B.20). These recommended actions included: 1) Implement habitat restoration and enhancement measures in Alder, Benewah, Evans, and Lake Creeks; 2) Purchase critical watershed areas for protection of fisheries habitat; 3) Conduct an educational/outreach program for the general public within the Coeur d’Alene Reservation to facilitate a “holistic” watershed protection process; 4) Develop an interim fishery for tribal and non-tribal members of the reservation through construction, operation and maintenance of five trout ponds; 5) Design, construct, operate and maintain a trout production facility; and 6) Implement a monitoring program to evaluate the effectiveness of the hatchery and habitat improvement projects. These activities provide partial mitigation for the extirpation of anadromous fish resources from usual and accustomed harvest areas and Reservation lands.
The target watersheds in this proposal have a combined basin area of 34,853 hectares and include 529 kilometers of perennial and intermittent stream channels (Table 1). The climate has the characteristics of a cold coastal type during the winter, and mild arid interior conditions during the summer. Average precipitation is approximately 50.8 cm per year, and annual precipitation increases with elevation to approximately 115 cm at 1,220 meters above mean sea level. The combination of winter weather and snow pack conditions is conducive to rapid melt and runoff in the target watersheds, where the majority of basin area ranges from 915 to 1,370 meters.
The ultimate and proximate control characteristics affecting the target watersheds are consistent with small watersheds in close proximity to one another and many of the general characteristics are shared among the various watersheds. The watersheds encompass 4 geologic districts, with mafic volcanic flows common in lower elevations and argillite and slate forming the parent material in middle and upper reaches of Alder, Benewah, and Evans creeks, respectively. Moderate to deep silt loam soils originating from loess, volcanic ash and alluvial deposits are a common feature in the middle reaches of Lake Creek with some deposition evident in both Benewah and Alder creeks as well. Ten different valley segment types and 21 different channel types are represented in the watersheds, however, 66% of identified reaches are low gradient, meandering, riffle/pool type channels occurring in gently sloping, broad alluvial valleys.
Table 1. Basin characteristics of the Lake, Benewah, Alder and Evans creek watersheds (From: Lillengreen et al. 1998).
Historically, the target watersheds were covered by a mix of forest types. Fire was an integral part of the ecology of these forests and was the principle disturbance mechanism prior to European settlement. Fire was used by the Coeur d’Alene people as a means to renew and control growth of unwanted plants in huckleberry and root gathering areas and to keep campsite areas clear of growth (R. Mullen, personal communication 2000). Thus it is not surprising that the most abundant tree species in the target watersheds are several ones adapted to a landscape periodically disturbed by fire. Low intensity surface fires occurring at intervals between 2 and 25 years favored ponderosa pine as the dominant species and maintained open stand conditions for much of the lowlands and foothills in the Lake Creek watershed. Along streams and wetlands, these forest types were associated with cottonwood and aspen, forming a mix of hardwood and conifers. Fire regimes for the forests of the hemlock series, common in the mid to lower slopes of Benewah and Alder creeks, were typically high intensity, stand replacement fires that occurred at longer intervals of perhaps 50 to 500 years (Agee 1993). In these forest types, the wetter sites would also have included cottonwood and aspen representing early serial communities (Cooper et al. 1991). There was likely a very large area of Benewah and Alder creeks that was dominated by seedling and sapling sized white pine, lodgepole pine, western larch and ponderosa pine regeneration that would have originated following one or more large fires prior to 1850 (CDA Tribe 2000). Also, as much as 8,240 hectares of forested habitats in Benewah, Alder and Evans creeks may have been burned in 1910; the last significant large fire to occur in the project area. Charcoal fragments and dead roots were recently found in test pits dug in the broad alluvial valley bottom along Benewah Creek, at depths ranging from 10 to 127 cm (DeVries and Fetherston 2008). This evidence is indicative of the processes affecting forest communities occurring historically (Holocene) throughout the valley bottom and is thought to be representative of forest disturbance mechanisms in the other watersheds.
Natural disturbance and succession regimes in the target watersheds have been severely altered during the last 100 years and are consistent with commodity-induced patterns described for much of the Interior Columbia Basin (USDA Forest Service 1996). The landscape elements influencing many of the watershed scale processes are reflective of these changes (Figure 1). Conversion of forestlands for homesteads, pasture, and agriculture, beginning as early as 1910, has enhanced the rain-on-snow phenomenon and accelerated the rate of snow pack depletion to varying extents. Old (160+years), unmanaged forests had been reduced to a fraction (~10%) of their historic extent by 1933 (Wyckoff 1937). Currently, 38% of lands in Lake Creek have been converted to agricultural and other uses, although forest conversion has been minimal since the 1950’s. Benewah (20%), Alder (17%), and Evans (18%) creeks have lesser amounts of forest conversion. In much of the remaining forested habitats, the old single- and multi-story forests resulting from more or less frequent disturbance by fire have largely been replaced by younger forests resulting from frequent harvest. The current communities often are more dense and have higher mortality, higher fuel loadings, and higher susceptibility to crown fire than historical communities. Alteration of riparian/wetland cover types is widespread and has led to localized channel instability, lowering of ground water tables, increases in water temperature, and loss of instream habitat diversity. More than 80% of historic wetlands in the target watersheds demonstrate some loss of functional value (CDA Tribe 2000). Geomorphic instability associated with channel incision, alteration of riparian vegetation, and increases in peak flow and sediment loading affect 6.5 miles of stream habitats, primarily in the mid elevation reaches of the Lake and Benewah creek watersheds. The proliferation of road construction also represents a significant disturbance. The areas with the highest density of roads occur on lands managed primarily for timber production. Portions of this road system have been constructed in some of the most sensitive locations (floodplains, and unstable land types) within the watersheds and the density of all road types ranges from 2.11-3.54 km/km2 in the affected watersheds (Table 1).
Figure 1. Comparison index for current and historic landscape elements in the target watersheds.
The target watersheds are tributaries to Coeur d’Alene Lake, either directly as is the case for Benewah and Lake creeks, or via the Coeur d’Alene River and the St. Maries/St. Joe rivers for Evans and Alder creeks, respectively. The present day Coeur d’Alene Lake ecosystem is dramatically different from the one known to the Schitsu’umsh (Coeur d’Alene Tribe) and described by Captain John Mullan in 1859 (Mullan 1963). Prior to construction of the Post Falls Dam in 1906, Coeur d'Alene Lake level was controlled by the elevation of the Lake outlet, the hydraulic capacity of the Spokane River outlet channel above Post Falls, and the amount and timing of inflow. In the absence of Project operations, the lake level would typically begin to recede in early June at a rate of 1 - 1.5 feet per month, reaching the minimum natural Lake elevation of 646 m (2,120 feet) by August or early September. Since the early 1940’s the dam has been operated to hold the lake surface elevation at approximately 648 m (2128 feet) after spring runoff subsides (usually by mid June), then in early September to draw the lake down to a minimum level of approximately 646 m by late November or early December. Project operation affects native fish production, especially native salmonids, in three ways (Coeur d’Alene Tribe 2005). First, the operation of the Post Falls HED alters the natural flood pulse process by inundating the lake/riverine/wetland ecosystem, altering the physical, thermal, and chemical nature of the habitats, and reducing the suitability of available habitats for native fishes. Second, life histories of native fishes require connectivity of migration corridors between the lake, rivers and tributaries. Inundation from Project operation seasonally reduces connectivity by physically, thermally, and chemically altering these migration corridors. Finally, the inundated lake and river habitats maintain a food web of non-native fish species that prey upon and compete with native species; native salmonids are especially vulnerable.
Status of Westslope Cutthroat Trout
Westslope cutthroat trout (WCT; Oncorhynchus clarki lewisi) are native to the watersheds of the Coeur d’Alene Subbasin (hereinafter referred to as the Subbasin), and, within the Subbasin, have been found to express three different life history strategies as outlined by Northcote (1997): fluvial-resident, fluvial-adfluvial, and lacustrine-adfluvial (Table 2). The fluvial-resident life history generally completes all stages of its lifecycle in small tributaries. The fluvial–adfluvial life history rears in small tributaries, matures in larger river habitats of the Coeur d’Alene, St. Joe, and St Maries rivers, then returns to natal tributaries to spawn. The lacustrine-adfluvial life history (hereinafter referred to as adfluvial) rears in small tributaries, matures in Coeur d’Alene Lake (CDA Lake), then returns to natal tributaries to spawn. Each life history strategy shares a cyclic sequence of migrations (trophic, refuge, and reproductive) among respective habitats used for feeding, wintering, and spawning.
Historically WCT were the dominant salmonid in streams of the Subbasin (Scholz et al. 1985; Behnke and Wallace 1986). Although data describing historical abundances of WCT are scarce, historical oral accounts suggest that densities in watersheds that drain into CDA Lake were high. The lacustrine-adfluvial life-history variant, whose migratory behavior permitted the exploitation of optimal rearing habitats in the more productive lake environment, conferred a large size at maturation with concomitant high levels of fecundity. Currently, it is not uncommon for lacustrine-adfluvial spawners in the Subbasin to attain lengths that exceed 450 mm (Vitale et al. 2008; Vitale et al. 2009). Further, the migratory life-history strategy of the adfluvial variant likely increased the probability of inter-basin straying of adult spawners. Genetic studies have revealed low levels of genetic differentiation among sampled populations in the Subbasin (Fst of 0.04) compared with other WCT populations across the subspecies range (Fst of 0.333) (Spruell et al. 1999; Corsi et al. 2010). Evidently, a level of interconnectedness among putative subpopulations in watersheds of the Subbasin existed in the past.
Currently, the CDA Tribe’s conservation strategy for WCT in the Subbasin emphasizes the recovery of the migratory, productive adfluvial variant and the maintenance of connectivity among subpopulations to promote a metapopulation structure that is resilient to natural (or introduced) disturbances. In light of this conservation strategy, it is recognized that populations could be at risk to potential hybridization with introduced rainbow trout (Oncorhynchus mykiss) if not isolated by barriers (Shepard et al. 2005). However, recent genetic analyses revealed relatively low rates of genetic introgression between WCT and rainbow trout in the subpopulations analyzed, with evidence of only infrequent episodic hybridization events (Spruell et al. 1999; Corsi et al. 2010). Thus, the current status of WCT stocks in the Subbasin indicate a relatively pure metapopulation structure with minimal hybridization, and consequently, a strategy that permits unrestricted movement within and among our target watersheds will be sustained.
Though WCT are still widely distributed in the Subbasin, life-history strategies have been lost in some watersheds and, in other watersheds, the spatial distribution has been contracted and fragmented (Intermountain Province Subbasin Plan 2004). For example, trapping studies conducted by the Tribal Fishereies Program in the mid 1990’s indicated that the migratory life-history variants are no longer prevalent in either the Alder or the Evans creek watersheds (Lillengreen et al. 1993; Lillengreen et al. 1996). In addition, though WCT are currently distributed widely across both mainstem and tributary reaches in Evans Creek, WCT in Alder Creek have been relegated to lower mainstem reaches, and in both Benewah and Lake creek watersheds, WCT distributions are disjunct with densities in upper tributary reaches much higher than those in mainstem reaches. Both non-native introductions (Dunham et al. 2002; Shepard 2004; Quist and Hubert 2005) and habitat loss, such as high summer rearing temperatures in mainstem habitats (Dunham et al. 1999; Paul and Post 2001; Sloat et al. 2001; de la Hoz Franco and Budy 2005) likely explain the distributional patterns observed for WCT in our watersheds.
Table 2. Summary of life history strategies for westslope cutthroat trout in four target watersheds in the Coeur d’Alene Subbasin (after Northcote 1997). T=Tributary, R=River, L=Lake.
There are a number of limiting factors that have contributed to a decline in productivity for native resident/adfluvial fish stocks within the target watersheds, as reflected in the QHA analysis completed for the Subbasin Plan. Habitat factors include alteration of stream flow patterns, increased sediment production and delivery to streams, localized instances of channel instability, reduction in overall habitat diversity/complexity, and elevated summer water temperatures in some mainstem reaches (Intermountain Province Subbasin Plan 2004). In two of the target watersheds, competition with introduced, non-native brook trout (Salvelinus fontinalis) is an additional limiting factor. The magnitude and severity of impacts varies greatly between the watersheds, which are ranked 1st, 3rd, 16th, and 21st (out of 36), with regard to their deviation from the reference habitat conditions for westslope cutthroat trout in the subbasin (Intermountain Province Subbasin Plan 2004). Many of these major limiting factors are addressed by this project and are discussed more fully below.
Lake, Benewah and Alder creeks are identified on the 1998 303(d) list of impaired water bodies. Water quality limited reaches have been identified because increased sediment loadings to the respective streams reduce the quality of habitats necessary for fish spawning and overwinter survival. Of these watersheds, only the Lake Creek watershed has an established Total Maximum Daily Load (TMDL) allocation for nonpoint source pollutants (USEPA 2005). The sediment budget constructed for the watershed shows agricultural sheet and rill erosion to be the largest contributor to the stream system, accounting for 78% of the total delivery to streams (CDA Tribe 2000). Using measured flow, turbidity, and TSS data, the Lake Creek sediment TMDL was calculated with an overall load allocation to nonpoint sources of 4,878.0 tons/year. This load allocation corresponds to a 56 percent reduction in existing nonpoint source sediment loadings.
The environmental impact of forest roads are well known and widely documented. Mills et al. (2007) and others summarized the environmental effects of forest roads on aquatic resources as 1) restriction of fish, flow, sediment and debris passage at stream crossing structures; 2) input of sediment in amounts over background; 3) alteration of aquatic habitat from sediment, increased fines in stream sediment, and, for roads adjacent to streams, directly filling and eliminating habitat; and 4)change in hydrology and stream flow when roads intercept rainfall and groundwater and alter rate of water delivery to streams. Lee et al. (1997) found that road density had the highest correlation of any anthropogenic action on the population status of cutthroat trout. Increasing road density has a negative affect on the environmental baseline condition. Within the target watersheds, road density (mean=3.07 km/km2) and riparian road density (mean=0.38 km/km2) exceed the mean values for managed watersheds analyzed by Kershner et al (2004). Several subbasins within the target watersheds also have road densities that exceed the threshold (2.5% of basin area) where fine sediment in spawning gravels increased above natural levels (Cederholm et al., 1982).
A recent inventory and assessment of non-paved roads to predict sediment detachment and delivery was completed in 2008 as a critical step in prioritizing restoration opportunities for addressing the effects of sediment in streams for the target watersheds (Middel et al., 2009). For study roads, Benewah Creek has the highest predicted sediment delivery at 286.5 tons/yr, followed by Lake Creek (84.05 tons/yr), Alder Creek (5.94 tons/yr) then Evans Creek (3.93 tons/yr). In addition to road surface condition, stream crossings were also evaluated in terms of their potential for contributing excess sediment to the streams. The Evans Creek watershed had 25% of the crossings in need of immediate attention while the Lake Creek watershed had the least, with only 6% of the crossings in need of immediate attention.
Coarse Woody Debris
Researchers have attributed wood volume and/or frequency as influential in processes operating at the channel reach, valley bottom, and landscape scales. Many studies indicate that most pools in moderate-gradient, cobble- and gravel-bed forest streams are either formed by or strongly influenced by wood (Andrus et al. 1988; Robison and Beschta 1990; Abbe and Montgomery 1996). Within several of our target watersheds lack of large woody debris, both within the stream channel and the adjacent floodplain, has been identified as a contributor to poor habitat quantity and quality in low-order streams which represent the core refugia for spawning and early life stage rearing.
A survey of 74.1 km of 2nd order tributaries and adjacent riparian habitats in the target watersheds identified considerable variability in wood loading and function among the watersheds, reflective of the recent management legacy in adjacent riparian forests (Miller et al. 2008). The frequency distribution by size class for coarse woody debris (CWD) indicated that most of the coarse wood (mean = 65%, range = 58-74%) came from small diameter trees (<25.4 cm [10 in] diameter) and nearly all the wood (95%) was less than 50.8 cm in diameter. Our data also indicate that only a small proportion (about 3% overall) of in-stream wood pieces form pools, with the probability of providing habitat function increasing with piece diameter. The longitudinal percentage of pool habitat in the surveyed reaches was generally low, ranging from 11.4% to 38.9%. By comparison, the 7-year status review on PACFISH/INFISH long-term monitoring sites with similar channel geometry reported that on average 48.7% and 53.8% of managed and unmanaged reaches, respectively, were comprised of pool habitats (Henderson et al. 2005). Our data also suggest that any reduction in wood abundance translates directly to a reduction in number of pools.
Only Evans and Alder Creeks had volumes, 18.80 m3/100 m and 13.80 m3/100 m, that meet or exceed the median values gathered from other studies of managed and unmanaged sites in forest types similar to our study area (Young et al. 2006; Fox and Bolton 2007). Wood volumes in Benewah and Lake Creeks are significantly lower than the median values from comparable studies. The cumulative frequency distribution for wood abundance by volume indicated that only 19% and 8% of channel length in Benewah and Lake Creeks, respectively, meets a threshold of 9 m3/100 m. The reach scale distributions of CWD we observed in the Lake and Benewah watersheds are indicative of impaired recruitment processes. This limiting factor can be addressed through a combination of management actions, including additions of CWD, adoption of alternative management practices for some riparian areas, and conservation of areas with well-functioning riparian wood recruitment processes (Beechie and Bolton 1999; Roni et al. 2002).
WCT move upstream and downstream throughout their lives seeking out spawning, rearing, feeding, resting, and refuge areas. As they move through the stream, they encounter road-stream crossings in the form of fords, culverts, or bridges. The ability of a WCT to pass a culvert depends on a variety of factors including the depth of the pool downstream of the culvert, the velocity and depth of water in the culvert, the height the fish has to jump to enter the culvert, the size of the fish, the number of passage attempts, distance of migration, and the presence of large wood and other debris in the culvert (Reiser et al. 2006). Removal of barriers increases the habitat available for fish to utilize and ensures the survival of different life histories. Barriers can isolate segments of the population and can perhaps increase local extirpation (Cahoon et al 2005). Loss of spawning habitat is critical because it could lead to decreased fish production.
In 2008, a study was completed examining fish passage at stream crossings in important spawning and rearing areas within the target watersheds (Middel et al. 2009). The stream crossings were surveyed using methods described in Clarkin et al (2006). A coarse screen developed by Region 1 of the Forest Service was used along with the modeling program FishXing (1999) to rate the crossings in terms of barrier status. It was found that each watershed had greater than 30% of all fish bearing stream crossings acting as total barriers. Benewah and Lake Creeks had over 40% of stream crossings acting as juvenile barriers. Nearly 40% of all stream crossings in Evans Creek provide full passage while approximately a 25% of stream crossings were completely passable in the other three watersheds. It should be noted that recent fish passage study in Montana showed that fish passage can actually occur through culverts that are rated as barriers due to the conservative nature of Fish Xing and the limited knowledge regarding swimming and jumping abilities for different sizes of many species of fish (Cahoon et al. 2005).
Temperature
The legacy of land-use activities in the target watersheds have contributed to elevated stream temperatures through various mechanisms. Streamside riparian canopy closure has been reduced in each of the target watersheds through past harvest regimes with substantial impacts to the older coniferous stands. Channel incision, in part due to the loss of riparian and floodplain vegetation, also has contributed to elevated summer water temperatures due to a reduction in overbank flooding and concomitant loss of groundwater recharge from floodplain storage during summer base flows (Brunke and Gonser 1997). Channel incision has affected approximately 2.4 and 8 km of upper mainstem habitats in Lake and Benewah creeks, respectively. The lack of deep pools in mainstem habitats, in part explained by channel incision and the paucity of in-stream LWD, also offers minimal refuge to high ambient stream temperatures during summer growing periods for WCT.
Generally, our watersheds exhibit a longitudinal gradient of increasing temperature in a downstream direction, with upper 2nd and 3rd order tributaries providing more favorable rearing temperatures for WCT than lower mainstem reaches during mid-summer periods. For example, summer temperatures typically remain below 17oC, a value above which is considered sub-optimal for cutthroat trout growth (Bear et al. 2007), more than 95% of the time in upper reaches of Lake Creek tributaries and in monitored tributaries in the upper Benewah watershed, whereas temperatures commonly exceed this threshold value more than 50% of the time in downstream main-stem reaches (Firehammer et al. 2011). Given the consistently higher densities of cutthroat trout observed in tributary than in mainstem habitats, the differences in mid-summer rearing temperatures between tributary and mainstem reaches likely explain in part the distributional patterns of cutthroat trout observed in both watersheds (Dunham et al. 1999; Paul and Post 2001; Sloat et al. 2001; de la Hoz Franco and Budy 2005).
Although main-stem temperatures in our watersheds are generally unsuitable for WCT during summer rearing periods, cold-water inputs from groundwater sources are present in floodplain habitats in some of the broad, unconstrained valley reaches. Monitored springbrooks within the unconstrained reach of the upper Benewah mainstem have consistently displayed temperature signatures during summer months that were much cooler than those recorded in adjacent mainstem habitats. Active channel restoration that reconnects mainstem reaches with the adjacent floodplain should increase the influence of these cold-water groundwater sources and promote hyporheic dynamics that moderate main channel summer temperatures and create thermal refugia for WCT.
Non-native Interactions
Non-native brook trout, a species that has been found to negatively impact native cutthroat trout where sympatric populations occur (Griffith 1988; Adams et al. 2001; Dunham et al. 2002; Peterson and Fausch 2003; Peterson et al 2004; McGrath and Lewis Jr. 2007), have been found only in the Alder and Benewah creek watersheds. Brook trout are the predominant salmonid in Alder Creek, and in the upper watershed where brook trout densities are the highest, cutthroat trout are rarely captured suggesting their probable displacement (Dunham et al. 2002). Compared with Alder Creek, the distribution of brook trout in the upper Benewah watershed overlaps with that of WCT, where they are often out-numbered by the native salmonid. Further, brook trout densities are substantially more modest in upper Benewah than in the Alder watershed. Despite the lower densities of brook trout in the Benewah watershed, systems that have been degraded from their natural condition (e.g., loss of riparian vegetation) may be more vulnerable to invasion by brook trout than those that have been relatively undisturbed (Shepard 2004). As such, implementing a brook trout removal program in the Benewah watershed in conjunction with improving rearing conditions for WCT through habitat restoration should provide a better opportunity for WCT to recover and persist in the presence of low brook trout abundance.
Currently, the mechanisms and processes that may be impacting adfluvial WCT during migratory periods and residence in CDA Lake are largely unknown. Multiple migrations by both juvenile and adult fish into riverine and lacustrine habitats throughout their life cycle increases the potential for temporal and spatial overlap with non-native predators and competitiors in CDA Lake, and in the Coeur d’Alene, St. Joe, and St. Maries Rivers. In previous studies conducted on CDA Lake (Rich 1992; Anders et al. 2003), WCT were found to be a principal prey item in northern pike stomachs. In addition to the large size that can be attained by northern pike and their piscivorous feeding habits, the spawning behavior of northern pike increases the opportunity for temporal and spatial overlap with both juvenile and adult WCT migrants. Though consumption rates have not been quantitatively evaluated, northern pike may substantially impact numerical abundances of WCT during periods when WCT are migrating through shallow-water shoreline habitats of CDA Lake. Introduced Chinook salmon (O. tshawytscha), smallmouth bass (Micropteurs dolomieu), and largemouth bass (M. salmoides) are other species that may potentially prey upon WCT in the lake.
Other trophic level interactions may also be impacting growth and survival rates of WCT in CDA Lake. Cutthroat trout have been reported to occupy colder mid-water, pelagic habitats during summer residence in lacustrine environments, avoiding warm surface waters, and frequenting littoral zones largely during cooler spring and fall periods (Baldwin et al. 2002; Nowak and Quinn 2002). Similarly, Nilsson and Northcote (1981) found cutthroat trout to feed mostly in mid-water pelagic zones, utilizing littoral areas for foraging primarily when sympatric populations of the more aggressive rainbow trout were present. Consequently, there is potential for niche overlap to occur between WCT and non-native kokanee in mid-water pelagic zones of CDA Lake during the summer, though competitive mechanisms have not adequately been examined. To better evaluate the overall strategy of our recovery program, it is imperative that juvenile-to-adult survival rates are better understood given the potential for trophic-level interactions to impact population demographics during lake residence.
Improve Stream Habitats (OBJ-1)
Support recovery of resident and migratory westslope cutthroat trout through restoration and enhancement of landscape processes that form and sustain riverine habitat diversity. Benchmarks as follows: S1: Reduce sediment delivery by 75% from hydrologically connected road segments; S2: Treat all culverts with high risk of failure; H1: Reduce length of hydrologically connected road segments to less than 0.2 mi/sq. mi.; H2: Increase the frequency of overbank flows (=1.5-2yr flood) in incised tributary/mainstem reaches; R1: 70% of stream adjacent habitat able to meet instream wood loading criteria over 150 years; R2: 75% canopy cover in 2nd order streams; C1: 70% of available habitat to meet CWD loading of 6m3/100m; C2: Treat all culverts blocking adult passage and other high/mod priority culverts on a case by case basis; W1: Less than 16°C in tributaries, less than 18°C in mainstem; less than 25% exceedance of 17°C during rearing; >3°C differential in mainstem pools.
Track Status and Trends in Westslope Cutthroat Trout Demographics and Population Structure (OBJ-2)
Track abundance, productivity, spatial distribution, and life-history diversity at various spatial scales (e.g., watershed, tributary, reach) and for various life stages to assess progress toward attaining management benchmarks. Benchmarks are as follows:
(P)roductivity: P1 - Increasing 10-year trend in adfluvial spawners (i.e., two generations) with a trend variance less than 0.05; P2 - Increasing 10-year trends in stream densities; P3 - Greater than 10% juvenile to first time spawner return rate; P4 - Greater than 50% return rate for repeat spawners. (S)patial distribution: S1 - Cutthroat trout are distributed across reaches within tributaries, across tributaries spatially distributed within watersheds, and across watersheds within the Basin. (D)iversity: D1 - Ensure that life-history diversity, with emphasis on the adfluvial variant, is expressed within the Basin. D2 - Ensure suitable corridors exist to maintain connectivity among critical habitats. Evaluate Effectiveness of Habitat Restoration (OBJ-3)
Conduct monitoring to track trends in physical habitat attributes to assess progress toward achieving or maintaining the benchmarks that were outlined in Objective 1.
Conduct monitoring to evaluate whether cutthroat trout populations positively respond to habitat restoration actions and are progressing toward achieving the benchmarks listed under Objective 2. |
Address Impacts from Non-native Introduced Fishes (OBJ-4)
Maintain low levels of brook trout abundance in the upper Benewah watershed that achieve the following performance benchmarks:
(1) Brook trout densities of age 1 and older fish less than 7.5 fish / 100m, and of mature adult fish less than 2 fish / 100m. (2) 10-year brook trout density trends that are not significantly increasing. (3) Absence of a detectable reproductive compensatory response in mature brook trout resulting from suppression strategies. Address impacts (e.g., predation, competition) from non-native species in Lake Coeur d'Alene to achieve the in-lake survival benchmarks of 10% and 50% for return rates of juvenile and repeat spawning cutthroat trout, respectively (See Objective 2) Increase Coordination and Participation Among Stakeholders (OBJ-5)
Conduct outreach and education activities in conjunction with restoration and monitoring efforts to effectively connect people affected both directly and indirectly to project work and build community support for restoration and management initiatives. Benchmarks include: reach more than 4000 stakeholders annually through combined outreach strategies; involve more than 1000 students/teachers annually in education programs; and increase enrollment of Tribal members in natural resource management related degree programs at the post-secondary level.
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To view all expenditures for all fiscal years, click "Project Exp. by FY"
To see more detailed project budget information, please visit the "Project Budget" page
Expense | SOY Budget | Working Budget | Expenditures * |
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FY2019 | $1,542,723 | $1,538,299 | |
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General | $1,540,120 | $1,535,703 | |
General - Within Year | $2,603 | $2,596 | |
FY2020 | $1,588,020 | $1,588,020 | $1,579,228 |
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General | $1,588,020 | $1,579,228 | |
FY2021 | $1,588,020 | $1,539,069 | $1,509,869 |
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General | $1,539,069 | $1,509,869 | |
FY2022 | $1,588,020 | $2,687,375 | $1,501,768 |
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General | $2,687,375 | $1,501,768 | |
FY2023 | $1,588,020 | $1,991,056 | $2,790,359 |
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General | $1,991,056 | $2,790,359 | |
FY2024 | $1,657,893 | $2,818,036 | $2,088,488 |
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Fish Accord - Coeur d'Alene | $2,818,036 | $2,088,488 | |
General | $0 | $0 | |
FY2025 | $4,526,884 | $4,526,884 | $943,103 |
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Fish Accord - Coeur d'Alene | $4,526,884 | $943,103 | |
* Expenditures data includes accruals and are based on data through 31-Mar-2025 |
Cost Share Partner | Total Proposed Contribution | Total Confirmed Contribution |
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There are no project cost share contributions to show. |
Fiscal Year | Total Contributions | % of Budget | ||
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2024 | $455,316 | (Draft) | 14% | (Draft) |
2023 | $525,800 | 21% | ||
2022 | $1,343,586 | 33% | ||
2021 | $279,489 | 15% | ||
2020 | $645,951 | (Draft) | 29% | (Draft) |
2019 | $372,894 | (Draft) | 19% | (Draft) |
2018 | $153,100 | 9% | ||
2017 | $83,272 | 5% | ||
2016 | $224,520 | 12% | ||
2015 | $75,731 | 5% | ||
2014 | $177,890 | 11% | ||
2013 | $72,200 | 4% | ||
2012 | $695,500 | 31% | ||
2011 | $466,200 | 23% | ||
2010 | $314,871 | 17% | ||
2009 | $63,725 | 4% | ||
2008 | $446,254 | 22% | ||
2007 | $549,989 | 29% |
Annual Progress Reports | |
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Expected (since FY2004): | 22 |
Completed: | 12 |
On time: | 11 |
Status Reports | |
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Completed: | 80 |
On time: | 46 |
Avg Days Early: | 1 |
Count of Contract Deliverables | ||||||||||||||
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Earliest Contract | Subsequent Contracts | Title | Contractor | Earliest Start | Latest End | Latest Status | Accepted Reports | Complete | Green | Yellow | Red | Total | % Green and Complete | Canceled |
10885 | 27934, 33533, 37842, 42560, 47583, 52937, 57531, 61299, 65197, 69003, 72851, 76243, 76828 REL 1, 76828 REL 4, 76828 REL 9, 76828 REL 16, 76828 REL 22, 84053 REL 3, 84053 REL 9 | 1990-044-00 EXP CDA FISHERIES HABITAT RESTORATION | Coeur D'Alene Tribe | 07/01/2002 | 05/31/2026 | Issued | 80 | 553 | 33 | 0 | 30 | 616 | 95.13% | 2 |
BPA-5602 | PIT Tags - Coeur D'Alene Res. Fisheries Habitat | Bonneville Power Administration | 10/01/2006 | 09/30/2007 | Active | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
BPA-3391 | PIT Tags - Coeur d'Alene Tribe | Bonneville Power Administration | 10/01/2007 | 09/30/2008 | Active | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
BPA-4311 | PIT Tags - Coeur D'Alene Reservation Habitat | Bonneville Power Administration | 10/01/2008 | 09/30/2009 | Active | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
BPA-4976 | PIT Tags - Coeur D'Alene Res Fisheries Habitat | Bonneville Power Administration | 10/01/2009 | 09/30/2010 | Active | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
BPA-5701 | PIT Tags - Coeur D'Alene Res. Fisheries Habitat | Bonneville Power Administration | 10/01/2010 | 09/30/2011 | Active | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
BPA-6341 | PIT Tags - Coeur D'Alene Res. Fisheries Habitat | Bonneville Power Administration | 10/01/2011 | 09/30/2012 | Active | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
BPA-10796 | Tag Readers - CDA Reservation Fisheries Habitat | Bonneville Power Administration | 10/01/2018 | 09/30/2019 | Active | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
Project Totals | 80 | 553 | 33 | 0 | 30 | 616 | 95.13% | 2 |
Contract | WE Ref | Contracted Deliverable Title | Due | Completed |
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10885 | E: 175 | COPY: Deliverable complete | 9/27/2005 | 9/27/2005 |
10885 | H: 29 | COPY: Deliverable complete | 12/16/2005 | 12/16/2005 |
10885 | G: 30 | COPY: Deliverable complete | 1/31/2006 | 1/31/2006 |
10885 | J: 47 | COPY: Deliverable complete | 5/30/2006 | 5/30/2006 |
10885 | K: 47 | COPY: Deliverable complete | 5/30/2006 | 5/30/2006 |
33533 | I: 29 | Completed project | 11/23/2007 | 11/23/2007 |
33533 | D: 115 | Completed Survey and Management Recommendations | 5/30/2008 | 5/30/2008 |
37842 | G: 30 | Complete Channel Construction | 9/26/2008 | 9/26/2008 |
37842 | E: 175 | Completed Design Report | 3/31/2009 | 3/31/2009 |
37842 | D: 115 | Final report of survey results and management recommendations | 5/30/2009 | 5/30/2009 |
37842 | AA: 99 | Summary of Education/Outreach Activities | 5/30/2009 | 5/30/2009 |
37842 | F: 175 | Channel Design Report | 5/30/2009 | 5/30/2009 |
42560 | D: 30 | Complete Restoration Design Elements | 8/14/2009 | 8/14/2009 |
42560 | H: 30 | Complete channel construction | 10/30/2009 | 10/30/2009 |
42560 | E: 47 | Vegetate Disturbed Areas | 4/30/2010 | 4/30/2010 |
42560 | F: 47 | Plant 6,040 Deciduous Trees and Shrubs | 4/30/2010 | 4/30/2010 |
42560 | C: 114 | Project Descriptions/Agreements | 5/14/2010 | 5/14/2010 |
42560 | I: 47 | Vegetate Disturbed Areas | 5/14/2010 | 5/14/2010 |
47583 | Q: 157 | Abundance Estimates of Salmonids in Target Watersheds | 10/15/2010 | 10/15/2010 |
47583 | W: 157 | Description of beaver dam characteristics, stability and physical habitat influence | 10/29/2010 | 10/29/2010 |
47583 | T: 162 | Abundance and Life-History Information for Adfluvial Westslope Cutthroat Trout | 2/28/2011 | 2/28/2011 |
47583 | U: 162 | Trend Analyses of subbasin and watershed scale salmonid abundance | 2/28/2011 | 2/28/2011 |
47583 | AA: 162 | Analyses of physical habitat and temperature dynamics at reference and treatment sites | 2/28/2011 | 2/28/2011 |
47583 | Z: 160 | Updated database of physical habitat attributes, temperature and discharge measurements | 5/27/2011 | 5/27/2011 |
47583 | P: 158 | PIT Tag Juvenile Cutthroat in Lake and Benewah Creeks | 5/27/2011 | 5/27/2011 |
47583 | M: 70 | Install Migration Traps in Lake and Benewah Creeks | 5/27/2011 | 5/27/2011 |
47583 | O: 70 | Operational PIT Tag Systems | 5/27/2011 | 5/27/2011 |
52937 | R: 157 | Indices of abundance of salmonids in target watersheds. | 7/30/2011 | 7/30/2011 |
52937 | Y: 157 | Measurement of thermal heterogeneity in Benewah Creek | 8/26/2011 | 8/26/2011 |
52937 | J: 190 | Remove Brook Trout from Benewah Creek | 9/30/2011 | 9/30/2011 |
View full Project Summary report (lists all Contracted Deliverables and Quantitative Metrics)
Explanation of Performance:The recent major accomplishments of this project are described in this section. These accomplishments are organized under headings consistent with the project objectives described in this proposal, which include: 1) improve stream habitats; 2) track trends in westslope cutthroat trout demographics and population structure; 3) evaluate effectiveness of habitat restoration; 4) address impacts from non-native introduced fishes; and 5) increase coordination and participation among stakeholders. To avoid redundancy in presentation, several key initiatives to improve stream habitats are described under the heading “Evaluate Effectiveness of Habitat Restoration” to emphasize the role of this type of monitoring in informing the approach and direction of management actions over different spatial scales and timeframes (i.e. adaptive management). The representative deliverables for this recent work are referenced by contract and work element where appropriate.
The approach to restoration in the target tributaries has evolved over time to more successfully translate watershed analyses, resource inventories and assessments and monitoring results into the management actions needed to achieve project goals (Contract 42560/WE C114; Contract 33533/WE D115; Contract 37842/WE D115). The recent project history reflects a shift from opportunistic implementation of restoration projects to a more systematic approach for prioritizing management actions consistent with the refugia approach described by Reeves et al (1995) and Frissell and Bayles (1996) and a multispecies, analytical approach (Beechie and Bolton 1999). The former approach is rooted in the idea of protecting the best first and expanding restoration outward from areas of relatively intact habitats and populations. The approach acknowledges studies that indicate that restoration efforts focused near sources of colonists result in more-rapid species recovery (Huxel and Hastings 1999) and that recovery time increases with distance from colonization sources (Gore and Milner 1990). The later approach has been implemented as more detailed knowledge of factors limiting recovery have been developed and focuses on suites of landscape processes considered necessary to conserve multiple species.
A fundamental goal of the Coeur d’Alene Tribe Fisheries Program is to identify restoration and enhancement needs and opportunities in areas that have the greatest potential to improve habitat and translate into positive biological responses to recover depressed native cutthroat trout populations. Within this context we are interested in answering the question, “What are the highest priority restoration actions at the watershed scale and at finer spatial scales?” To help structure the process of identifying and prioritizing restoration actions we utilized a four-step process that connects watershed analyses and status and trend monitoring to prioritization through 1) setting clear goals and objectives for restoration activities, 2) selecting a prioritization scheme that is consistent with the goal, 3) using watershed assessments to identify restoration actions, and 4) prioritizing the list of actions (Beechie et al. 2008). These steps fit within the broader restoration process that we have used in developing other programmatic plans, such as the Fisheries Program Management Plan (Lillengreen et al. 1999) and Research Monitoring and Evaluation Plan (Vitale et al. 2002), which includes restoration planning, implementation, and evaluating the success of restoration actions (Figure 1).
Figure 1. Diagram of the restoration process and the steps used for identifying and prioritizing restoration actions that are nested within this broader process.
Ranked aquatic resource goals for the Coeur d’Alene Subbasin were developed as part of the NPPC Subbasin Planning process. The highest priority goal included protection and restoration of harvestable surpluses of naturally reproducing adfluvial adult fish from Lake, Benewah, Evans and Alder creeks and other populations well-distributed in tributaries throughout the basin (Intermountain Province Subbasin Plan 2004). The restoration goal that is corollary to this subbasin goal is to “support recovery of resident and migratory westslope cutthroat trout through restoration of landscape processes that form and sustain riverine habitat diversity, while managing the riparian/aquatic interface for both wildlife and limited domestic uses that do not conflict with protection of water quality, public health and the fisheries resource”. This goal is stated in the context of landscape and aquatic processes that drive habitat degradation and species declines, as well as socioeconomic considerations, so as to be both realistic and explainable.
We developed specific process-based objectives and criteria for describing impairment to watershed process functions that would be useful in identifying the restoration actions needed to achieve the above goal and in prioritizing those actions (Table 1). The watershed processes that were considered included sediment, flood hydrology, riparian and channel processes, water quality and biological productivity. For each of these processes, criteria were developed that described the degree of impairment relative to the watershed or sub-watershed scale. It was difficult to find suitable criteria in the peer-reviewed literature for all of these functions. Where existing criteria were not available, we developed definitions based on results from our long-term status and trend monitoring (e.g., for biological productivity) and based on the range of measured values identified during watershed assessments (e.g., for sediment, flood hydrology, riparian and channel). Ratings of high and moderate indicated a degree of process impairment warranting restoration action.
Table 1. Restoration objectives for watershed process functions and definitions for process impairment criteria; ratings of high (H); moderate (M), and low (L) indicate the degree to which each impaired process alters riverine habitat conditions.
There are a variety of available prioritization approaches, and selecting an approach that matches restoration goals and assessment capabilities is helpful in linking restoration goals, watershed assessments, and prioritization into a coherent strategy for river restoration (Beechie et al. 2008). We selected a prioritization approach consistent with the logic approach (decision support system) described by Lewis et al. (1996), SRSRC (2004) and Cipollini et al (2005). This approach utilizes an array of semi-quantitative tools for prioritizing restoration actions, including, information developed from watershed assessments that describe causes of impairment, biological benefits associated with classes of restoration actions, as well as estimated costs. The fundamental objective is to assemble and weigh information considered important to setting priorities (Cipollini et al. 2005). The approach is considerably more flexible than others that were reviewed and allowed for incorporating values important to the Coeur d’Alene Tribe and local landowners.
A decision support system score sheet was developed to obtain a relative “score” for each planned project. Criteria were drafted to reflect the values embodied in the goal statement as well as the constraints of implementing projects within the target watersheds. The criteria include consideration of species that benefit from restoration, the degree to which restoration actions address causal processes, uncertainty associated with project actions and habitat/biological responses, and how the project accommodates local socioeconomic goals. The criteria are scored on either a discrete or continuous scale, as well as being weighted, then summed to a total score. Total scores are useful in differentiating projects (Table 2).
In the initial use of this approach, we selected just two of the focal watersheds, Benewah and Lake creeks, to develop a list of projects and conduct the preliminary prioritization of restoration efforts. These watersheds were chosen because they both have resident and adfluvial westslope cutthroat trout and relatively more restoration actions have been implemented compared with Alder and Evans creeks. In proceeding with this approach we recognize the importance of watershed scale restoration as well as the value in maintaining a treatment/control approach to monitoring action effectiveness. Within these two watersheds, 12 subbasins were delineated so that priorities could be viewed and implemented at multiple scales. These subbasins encompass the distribution of cutthroat within the watersheds and contain the critical habitats for spawning and early life stage rearing. The Lake Creek watershed includes three subbasins: Bozard, Upper Lake, and WF Lake; while the Benewah Creek watershed includes nine subbasins: Bull, Coon, Hodgson, Schoolhouse, SF Benewah, WF Benewah, Whitetail, Whittrock, and Windfall.
Watershed assessments and long-term monitoring data collected as part of this BPA funded project, provided most of the information needed to identify and prioritize restoration actions (Table 3). The most recent assessments included 1) large wood recruitment inventory and analysis which examined existing in-stream wood loads, stream conditions and the wood recruitment capacity of riparian forests associated with more than 74 km of streams (Miller et al 2008); and 2) inventory and analysis of road conditions and fish passage associated with 540 km of forest roads and more than 400 stream crossings (Duck Creek Associates 2009). These assessments provided the critical understanding of natural potentials as they relate to sediment, flood hydrology and riparian and channel function, and the degree to which restoration efforts can move habitats toward a re-expression of natural habitat capacity and quality (Poff and Ward 1990; Ebersole and Liss 1997; Frissell et al. 1997; Pess et al. 2003).
Table 2. Example of a project score sheet to facilitate prioritization of a list of restoration actions.
Table 3. Summary of assessments and inventories used to identify the condition of watershed processes and function.
In order to translate the watershed assessment results into a list of necessary restoration actions, we first prepared a summary to clearly identify which processes or functions were most impaired and most responsible for habitat degradation (Table 4). The summary identifies the degree of impairment for each of the subbasins in the Lake and Benewah creek watersheds consistent with the definitions for process impairment that were developed and described above. The summary of impairments was then translated into a list of restoration needs, which includes types of restoration actions, their locations, and approximate levels of effort needed to address each of the impaired processes (Table 5).
Prioritization of restoration actions is an important part of the overall exercise to ensure that limited restoration funds can be focused on actions that will have the greatest impact and locations that will receive the greatest benefit. To this end, the delineated subbasins were further ranked by relative restoration priority according to the overall level of impairment, proximity to restored habitats and the potential for increasing fish production (Table 5). A weighted impairment value was calculated for each subbasin, wherein a moderate impairment rating was scored as 1 point and a high rating was scored as 2 points and the scores were summed. Subbasins with the highest impairment values were considered higher priorities for restoration. Where impairment values for subbasins within the same watershed were equal, the rankings were modified to favor priority for subbasins in closer proximity (connectivity) to restored habitats or with greater potential for increasing fish production. This potential was indicated by the “current productivity distance”, defined as the difference in mean maximum/minimum cutthroat trout densities within the subbasin.
Table 4. Summary of process impairments identified by watershed assessment in subbasins within the Lake Creek and Benewah Creek watersheds. Subbasins lacking assessment data are indicated by ND.
Table 5. Summary of restoration needs and relative restoration priority by subbasin within the Lake Creek and Benewah Creek watersheds. Proximity to restored mainstem habitat is indicated as near (N) or far (F), where applicable.
A list of spatially explicit projects was developed to meet the stated process objectives for each of the highest priority subbasins (6 in Benewah Creek and 3 in Lake Creek). A total of 105 projects were identified and prioritized in these subbasins. Only two percent of the ownership in these project areas is Tribal, while 49 percent is owned by three private companies and an additional 39 percent is owned by 18 individual landowners (Figure 2). Therefore, sharing information generated through this project and coordinating planning, implementation and monitoring, with the goal of increasing participation with affected landowners, becomes a critical component of meeting our goals and objectives for recovery. Cumulatively, these projects affect 41.1 km of stream and riparian habitat (29.7 km in Benewah Creek, 11.4 km in Lake Creek), with fish passage projects expected to result in a significant short- and long-term response. The list of projects will be used over the next several years to negotiate landowner agreements for implementation, and serves as the core of on-the-ground work that is identified in this project proposal.
Figure 2. Number and distribution of planned restoration projects by ownership and project type.
We completed a survey of 74.1 km of 2nd order tributaries and adjacent riparian habitats in 2008 (Contract 33533/WE D115) with the goal of identifying conditions with respect to coarse wood recruitment (Miller et al. 2008). The objectives of this study were to:
Riparian habitats in the study area were classified into relatively homogenous polygons according to variables describing channel confinement, channel slope, vegetation type and composition, and lidar-derived canopy height and canopy cover. Field data was then collected for a representative sample constituting 26.6% of stream habitats in the study area to describe riparian vegetation, instream wood characteristics and channel attributes. Non-surveyed riparian stands were populated with tree lists derived from field-sampled stands for each structural class. We utilized several computer models to analyze the effects of three different management scenarios representing a range of current and potential future riparian conditions over a 150 year planning window. To model growth, yield and mortality we used the Forest Vegetation Simulator (FVS) model, developed and maintained by the USDA Forest Service. Data from 113 sampled stands containing 4,259 individual tree list records were used to drive simulations for silvicultural prescriptions associated with each management scenario at a 5-year time interval. For the wood recruitment modeling effort, we chose a spatially explicit model for in-stream wood recruitment and accumulation that adapted existing riparian wood recruitment algorithms (e.g., Sobota et al. 2006, Van Sickle and Gregory 1990) into a GIS framework, so that model outputs could be incorporated into other GIS-based models to 1) track in-channel wood abundance based on integration over time of wood inputs and wood depletion by decay and fluvial transport (e.g., Benda et al., 2003); and 2) relate wood-piece characteristics and channel attributes to the likelihood and type of habitat function.
We found that wood volumes in Benewah and Lake creeks are significantly lower than the median values from comparable studies (Young et al. 2006; Fox and Bolton 2007) and the observed reach scale distributions of CWD are indicative of impaired recruitment processes. In this study, we used spatially referenced survey data and spatially distributed models to characterize wood-loading potential and management effects at multiple scales. We found differences in predicted tree mortality between stand types, which translate to stand-specific recruitment rates. We found differences in habitat-forming potential with piece size and channel attributes, which translate to differences in the effects of wood between reaches. The site-specific aspects of these channel systems suggest that effects of riparian management will also vary reach to reach in terms of both the contribution of CWD to the channel (Figure 3) and in the frequency of wood-formed habitats (Figure 4). Additional detailed results from this assessment are described in the objectives section of this proposal under the headings Technical Background and Emerging Limiting Factors.
Figure 3. Comparison of modeled wood volume by channel segment under the No management and Idaho Forest Practices Act (IFPA) scenarios. Scatter in these plots indicates differences in the proportional increase in wood abundance between segments and differences in the pattern of points between graphs indicate differences between management alternatives. Points falling below the one-to-one line indicate a loss of modeled in-stream wood over time (from decay of current wood) and points above the line indicate an increase in modeled wood over time, from mortality of riparian stands. The graph on the right compares modeled wood abundance at 150 years under the no-management and IFPA scenarios. The greater the distance from the one-to-one line, the greater is the reduction of modeled wood abundance associated with thinning of the riparian stands.
Figure 4. Model predictions of basin average wood-formed pools for three management alternatives at 150 years (Miller et al. 2008).
We suggest that this limiting factor can be addressed through a combination of management actions, including additions of CWD, adoption of alternative management practices for some riparian areas, and conservation of areas with well-functioning riparian wood recruitment processes. Furthermore, the availability of both fish density and habitat data in our study area provide avenues for use of forest growth and recruitment model results for conservation and restoration planning following the general recommendations of Beechie and Bolton (1999) and Roni et al. (2002). From the perspective of habitat quality, management and restoration activities have two primary goals: 1) to develop and maintain well functioning riparian-channel interactions that promote a diverse channel environment with high-quality habitat; and 2) to improve conditions where current habitat quality is low. The appropriate activities to achieve these goals vary with channel and riparian zone attributes and current condition. We identified three primary attributes, each divided into nominal rankings, to aid in determination of appropriate actions and in setting of priority levels, as follows:
1. Fish abundance, defined as the average surveyed number of fish (cutthroat trout) per unit channel length. Rankings are:
2. Current in-stream wood abundance, in terms of wood volume per unit channel length. Rankings are:
3. Sensitivity to riparian management (thinning from below) in terms of the modeled difference for in-stream wood abundance (in terms of number of pieces per unit channel length) in 150 years with no thinning (no-management scenario) and with riparian thinning consistent with Idaho-Forest-Practices rules. Rankings are:
Each attribute is associated with specific types of management and restoration actions and unique combinations of these three attributes and their rankings provide 18 categories (Table 6). Management and restoration actions appropriate for the rankings in each category are then identified, with four resulting management categories: conservation, riparian management, addition of large woody debris with riparian management, and no action. Priority levels are based on the potential to maintain high and moderate fish abundances in light of sensitivity of future wood loading to riparian management. We have added two additional variables to further condition management guidelines and prioritization:
Table 6. Categorical summary of large wood recruitment results based on unique combinations of nominal attribute rankings with recommendations for management actions and priority.
Applying this strategy to the target watersheds provides detailed maps of management options and conservation/restoration priorities that can be addressed systematically at either the watershed or sub-watershed scale and be coordinated with implementation of other management actions. The overall effect of this recent study is to strengthen the restoration approaches we have adopted by applying detailed knowledge of factors limiting recovery and focusing management activities on suites of landscape processes considered necessary to conserve multiple species.
We completed an inventory and assessment of 539 km of forest roads and 407 stream crossings (Contract 37842/WE D115) in portions of four target watersheds in 2009 (Middel et al., 2009). The streams targeted for this survey included the most important habitats for spawning and rearing of westslope cutthroat trout in the respective watersheds. Roads in the survey area are variously managed by tribal, state, county, and private landowners. These roads provide access to a wide variety of activities important to Tribal members including access to traditional hunting and gathering areas, recreation, cultural/spiritual practices, timber harvesting, and access to private property. The objectives of the study were to: 1) evaluate sediment contributions from roads that are within proximity to critical areas for spawning and rearing habitat; 2) identify any complete or partial barriers that may affect the ability of native westslope cutthroat trout to access key spawning and rearing habitats; and 3) draft a planning document to identify priorities for restoration based on the study results. The methods and key results are summarized below, with additional detailed results described in the objectives section of this proposal under the headings Technical Background and Emerging Limiting Factors.
In this study, we applied both the State of Oregon and the State of Washington methodologies to help determine the current and near-term condition of roads in the four study watersheds. The State of Oregon’s “Rapid Watershed Risk and Current Condition Survey” (Mills et al. 2007), was used to determine the current and near-term condition of roads by rating road segment attributes and features with attention priority codes. These codes range from 1 to 5, with 1 indicating a need for immediate road work and 5 indicating that the road is in good working condition. Different environmental indicators were examined including location of critical areas, locations of hydrologically connected roads, stream crossing washout potential, condition of stream crossing structures, and condition of the road prism. Hydrologic connectivity occurs when water intercepted by the road prism flows from a road directly to a stream or waterway. The second model used for surveying roads was the Washington Road Surface Erosion Model (WARSEM) (Dube et al. 2004). This model predicts relative long term soil erosion and sediment delivery from roads. In this case, road segments that contributed sediment to stream were those that drained to an active stream channel, drained to a gully that drained to an active stream channel, or road segments that drained to areas that were located less than 200 feet from a stream. Geology, topography, precipitation, land use, and road characteristics are important variables used to estimate sediment delivery in WARSEM and these were derived using local values.
The results of the two different methodologies were combined to guide planning efforts for restoration. Priority road segments were identified for inspection and potential repair based on a positive hydrologic connectivity classification and an attention priority rating of 1 or 2. There were 4.7 miles of roads that fit this category. High sediment delivery road segments were also assigned high priority. A range of best management practices were identified to address these road condition priorities, including installation of cross drains, culvert replacement, reducing road gradient, increasing vegetation on cutslopes, and improving surface conditions. Reducing hydrologic connectivity of roads to streams is an especially important objective of forest road management and one that depends on engineering strategies which effectively divert road surface runoff to the forest floor where it can be filtered before entering waterways. We identified all such opportunities for “disconnecting” existing road segments from the drainage network. Furthermore, the list of BMP’s we identified was evaluated as to their potential effectiveness in reducing sediment delivery as a means of further prioritizing future restoration actions. For example, WARSEM predicts a greater than 60% reduction in sediment loading to streams when resurfacing from pit run to gravel and keeping all other attributes the same. This type of resurfacing has no effect on the cutslope sediment delivery. Another scenario we explored involved upgrading from a native surface to a gravel surface. In these instances, WARSEM predicts an overall reduction from 209 mean tons/annually to 45 mean tons/annually. When we applied a BMP of providing 90% - 100% cover to cut slopes, either by applying a hydro-mulch or straw on all cut slopes with less than 90% cover, WARSEM predicted a 36% reduction in sediment loading to creeks. Road gradient has a noticeable effect on sediment loading to creeks and we considered the effect of reducing road gradient on segments that were greater than 10%. WARSEM predicted a 60% reduction in sediment loading to creeks when road gradient was reduced from > 10% to 5 – 10%. The compilation of data derived from this evaluation exercise was particularly useful in identifying process-based objectives for sediment reduction. Additionally, it provides important information for monitoring the application of BMP’s such that estimates of sediment delivery can be tracked and modeled to allow for before and after comparisons of project effectiveness.
Physical stream data and culvert information was collected at each of 407 sites to assess fish passage. A fish passage screen developed by the US Forest Service Northern Region (Hendrickson 2008) was used to do a preliminary assessment of fish passage for adult and juvenile cutthroat trout at each stream crossing that was determined to be fish bearing. Fish bearing streams were defined as having less than 20% gradient and more than 3 feet bankfull width (WDFW 2000). This methodology was chosen primarily because it was developed by targeting resident-adult and resident-juvenile westslope cutthroat passage at existing road-stream crossings. Where the Northern Region Fish Passage Screen proved inconclusive, we utilized methodology from the National Inventory and Assessment Procedure for identifying Barriers to Aquatic Organisms Passage at Road-Stream Crossings (NAIP) developed by Clarkin et al. (2005). The data gathered for these inconclusive sites, 70 crossings in total, were input into the computer software FishXing (Beta V.3) to model fish passage. For modeling purposes, fish lengths of 23 cm for adults and 10 cm for juveniles were used. Low flow and high flow discharge was estimated using USGS regional regression equations developed for Idaho. A system was developed to rank each potential fish bearing crossing by watershed. A combination of barrier status and extent of habitat upstream was used to rank the identified barriers as low, moderate, or high priority for replacement. Fish barriers were ranked first according to the results of FishXing. If the percent of passable flows for adults was less than 50%, the crossing was given a higher priority. For those crossings not modeled in Fish Xing, a crossing that was identified as being both an adult and juvenile barrier was given higher priority than a crossing identified just as a juvenile barrier. Next, the amount of stream length upstream of the barrier that was less than 20% grade was determined. If this length was more than 1500 meters, a crossing was given a higher priority. Twenty four out of 121 identified barriers were given a high priority ranking (Figure 5). Development of this specific list of priorities will help to identify key landowner contacts to develop on-the-ground projects and to facilitate project implementation in areas where barrier removals should illicit the greatest biological responses.
Figure 5. Percentage of low, moderate, and high priority stream crossings per watershed based on total number of fish barriers identified during the 2008 fish passage assessment.
It is imperative that we have the capability to reliably track temporal changes in adfluvial spawners given that one of the primary objectives of our recovery efforts is to augment the number of returning adult cutthroat to our adfluvial watersheds. As such, sampling techniques for capturing and tagging fish have been improved since 2004, and as a result, we have been able to obtain more accurate and precise spawner abundance estimates. Beginning in 2005 in Lake Creek and in 2007 in Benewah Creek, we replaced the fixed-weir trap design with a floating weir design to intercept upriver migrating spawners (Tobin 1994; Stewart 2002; Photo 1). Owing to its flexible nature, the floating weir can more effectively accommodate high discharge and debris loading than the former design, and was able to be fished at a greater range of flows in our watersheds throughout migratory periods. However, because brief periods of high spring discharge were still observed to depress panels below the water surface permitting upriver migrants to pass and giving rise to variable capture efficiency across years (e.g., Lake Creek, 2005-2008; Table 7), additional changes were respectively made to floating weirs in Lake and Benewah creeks in 2009 and 2010 to further improve performance. Floating weirs were modified so that the panels could be manually elevated or lowered with a hoist to maintain their position above the water surface at a much greater range of discharge levels than before. Modifications were also made to the fixed-weir traps used to intercept post-spawn outmigrating adults in Lake and Benewah creeks in 2005 and 2007, respectively. Removable pop-out panels were incorporated into the trap design to alleviate hydrostatic pressure on the trap during high flow events (Photo 2). Although trap performance is sacrificed during brief high flow events when pop-outs are removed, structural trap damage and consequent lost trapping opportunities during rebuilding efforts are prevented. Trapping modifications likely explain the greater numbers of adult cutthroat captured in Lake Creek in more recent years and the consistency in trapping efforts since 2009, and, also explain, in part, the recent increase in adults captured in Benewah Creek since 2007 (Table 7).
Because of the increased number of adults captured in our traps, most notably as ascending adults at our floating weirs, we were able to obtain a sufficient sample size to initiate a mark-recapture program to estimate spawner abundance. Beginning in 2009, we began to opercle punch every ascending adult intercepted at our floating weirs, and from the recapture of a considerable percentage of these marked fish as post-spawn outmigrants in our fixed weir traps, have been able to obtain rather precise abundance estimates in recent years (Table 7). Currently, our migrant traps are installed at rkm 6.0 on the mainstem of Lake Creek and at river kilometer (rkm) 14.5 on the mainstem of Benewah Creek. In both watersheds, traps have been installed downriver of principal spawning tributaries and of most of the recently implemented and projected habitat restoration projects. In Benewah Creek, however, several perennial spawning/rearing tributaries exist below our trap location, and as a result spawner abundance estimates obtained at the current trap location do not reflect the production potential of the entire watershed. As a result, we are currently in the process of installing a floating weir at the mouth of Benewah Creek that has the capability to trap both ascending and descending spawners. This trap is expected to be operable in the spring of 2012 and our marking protocol will be employed to obtain a spawner abundance estimate for the entire watershed. The ability to obtain rather precise estimates of annual adult abundance should permit us to reliably assess the status of adfluvial spawners in our watersheds and track trends in this high-level indicator over time.
Photo 1. Floating weir used to capture ascending spawners at river kilometer 6.0 in Lake Creek. Photo does not depict the hoist that modified the trap design in 2009.
Table 7. Abundance estimates and number of fish captured for adfluvial cutthroat trout spawners and outmigrating juveniles in Lake and Benewah watersheds, 2004-2010. Captured adults were intercepted as ascending spawners and descending post-spawn outmigrants.
Photo 2. Fixed weir used to intercept post-spawn adults and outmigrating juveniles at river kilometer 6.0 in Lake Creek. Close-up of pop-out panel insert is depicted in the inset photo in upper-right corner.
Our status and trend monitoring program also tracks adfluvial juvenile production in Lake and Benewah creek watersheds. In combination with our adult spawner estimates, juvenile outmigrant abundance estimates and associated age structure information will permit the derivation of outmigrant per spawner ratios, a watershed-wide indicator that would allow tracking of trajectories in juvenile production in addition to aiding in the assessment of in-stream population response to our restoration actions (Bradford et al. 2005). Outmigrating juveniles are captured with the same fixed weir traps that are used to capture post-spawn adults. The greater numbers of juveniles captured in the Lake Creek trap since 2005 and in the Benewah Creek trap since 2007, compared to earlier years in both watersheds, likely reflect our improvements to the outmigrant fixed-weir trap design that were described above (Table 7).
Because of the increased success in capturing juveniles, we began a PIT-tagging program in 2006 in Lake Creek and in 2008 in Benewah Creek to annually generate outmigrant abundance estimates. Throughout the outmigration period, subsamples of captured juveniles (e.g., 40-80) were periodically tagged and released upstream of the trap to estimate capture efficiencies (Carlson et al. 1998). Release trials were typically conducted every 4-6 d, with a subsample of fish from each release trial held overnight before release to evaluate tag retention and survival rates (since inception of the release trial protocol, we have not had a tag shed nor a mortality). Generally, under amenable flow conditions, our capture efficiencies have exceeded 90% which give rise to rather precise outmigrant estimates (e.g., flow years of 2009 and 2010 in Lake Creek, Table 7). However, under years with extended high flow periods (e.g., 2008, Table 7) capture efficiencies can be extremely low which decrease our confidence in the overall abundance estimates. Furthermore, notwithstanding the inability to capture fish during periods of suspended trap operation during high flow events, we consistently are unable to effectively deploy traps early enough to sample the early part of the outmigration as evidenced by the large numbers of juveniles typically captured immediately upon trap installation. Consequently, outmigrant abundance estimates are undoubtedly biased low in most years. Given these concerns, we are considering an alternative mark-recapture protocol to address these biases that will be discussed more fully in our proposed deliverables.
The PIT-tagging program was also initiated to address the uncertainties that may be limiting survival rates of adfluvial cutthroat trout during lake residence. Accordingly, full duplex PIT-tag pass-through antenna arrays have been installed in close proximity (5-10 m) and downriver of floating weirs in the mainstem of both watersheds to interrogate tagged fish and supplement information obtained from adults captured in our traps. Given that the fixed PIT-tag antennas span the entire channel width in Lake Creek and interrogate the wetted channel in Benewah creek under most flows, the likelihood of detection would be great as upriver spawners linger in the vicinity of the detection field as they attempt to negotiate the trap. Further, tagged juveniles released as test batches upriver of the antenna array in Lake Creek demonstrate detection rates of 95-100% (Firehammer et al. 2010).
As of 2010, 4545 and 757 juveniles have been tagged in Lake and Benewah creeks, respectively. Interrogation data from these tagged fish suggest that a low percentage of outmigrating juveniles return to spawn as adults. Of the 2272 juveniles that have been tagged from 2005 to 2007 in Lake Creek (cohorts for which enough years have elapsed to evaluate return rates for juveniles with variable lake residence times), only 1.7% have been uniquely detected. Recent interrogation data from tagged Benewah creek outmigrating cohorts reveal similar results. Although empirical estimates of in-lake survival rates for adfluvial cutthroat trout are scarce, several studies have provided values with which comparisons may be drawn. Annual survival rates of 49% were estimated in Lake Koocanusa for cutthroat trout from reservoir entry as juveniles to first time spawning two years later which equates to around a 25% return rate (Huston et al. 1984). Gresswell et al. (1994) estimated a 16-25% return rate for adfluvial juvenile Yellowstone cutthroat trout emigrating from Arnica Creek in the Yellowstone Lake system in the early 1950’s. Compared with these studies, our juvenile-to-spawner return estimates are substantially lower. We also began PIT-tagging ascending spawners (tag placement in pelvic girdle) in 2009 that were captured in our floating weirs to evaluate post-spawn survival rates and return frequency of adults. Interrogations from the 2010 and 2011 seasons indicate that approximately 45% of the adults tagged in 2009 have already returned as repeat spawners. Apparently, our data suggest that juvenile survival, but not post-spawn adult survival, is limiting in-lake adfluvial production in our watersheds. Demographic modeling analyses for cutthroat trout have also found in-lake juvenile survival to be a key vital rate in determining overall population growth (Stapp and Hayward 2002).
Stream Densities of Cutthroat Trout
Our monitoring program has also conducted population surveys at established index sites distributed across tributary and mainstem reaches to evaluate cutthroat trout abundance trends at a much finer spatial scale than that attainable using our migrant trap data. Trend trajectories permit an examination of whether conditions appear to be improving or declining at local tributary, watershed, and regional scales. Trend monitoring also permits a description of temporal changes in spatial distributions to assess expansion rates of cutthroat trout populations to examine whether newly created suitable habitat is undergoing colonization. In addition to our adfluvial watersheds (Benewah and Lake creeks), these surveys are also conducted in Evans creek which supports a prevailing resident cutthroat trout population and serves as a reference watershed for our monitoring program within the basin given its more suitable rearing habitat for cutthroat trout. Our monitoring protocol entails electrofishing index sites during baseflow periods, and has employed multipass-depletion sampling procedures to obtain linear density estimates (fish / 100m).
Surveys conducted since 2004 generally reflect a spatial pattern of cutthroat trout distribution within each watershed that is consistent across years. In Lake and Benewah creeks, cutthroat trout were primarily found in tributary rather than mainstem reaches, though distributions within tributaries varied between the two watersheds. Whereas in Benewah Creek densities of cutthroat trout were typically similar across sites within each of the surveyed tributaries, cutthroat in Lake Creek were most often captured at uppermost tributary index sites, with estimated densities at least 4-5 times greater in upper than in lower reaches (Figure 6). In comparison to our adfluvial watersheds, cutthroat trout in Evans Creek were spatially distributed across the watershed and typically observed at comparable densities in both mainstem and tributary index reaches during annual surveys. These distributional data have allowed us to identify reaches in both Benewah and Lake creeks where suboptimal rearing conditions may be present and has guided prioritization efforts for implemented and propective habitat improvements in mainstem and tributary reaches.
Index site abundance data collected from 2003 to 2009 also revealed the presence of temporal trends in age one and older cutthroat trout in our monitored watersheds, though the abundance trajectories varied among the systems surveyed. Synchronous trends in cutthroat abundance among reaches were detected in both the Evans Creek watershed and the upper Benewah Creek watershed as supported by a repeated measures analysis. In Evans Creek, though there was evidence of a linear increase in abundance over time, a greater portion of the annual variability in abundance was explained by a cyclical trend (Table 8). Generally, densities were found to decrease from 2003 to 2005, exhibit an increase from 2005 to 2007, and then decrease over the next two years, so that in half of the reaches densities in 2009 were not appreciably different from those in 2003 (Figure 7). In comparison, cutthroat trout in upper Benewah Creek (i.e., upriver of the 9-mile bridge) displayed a more pronounced linear increase in tributary-wide densities over time (Table 8). Densities from 2007 to 2009 were approximately twice that estimated from 2003 to 2006 in each of the five monitored tributaries (Figure 8). Similar concurrent trends, however, were not apparent in tributary and mainstem reaches downriver of 9-mile bridge in the Benewah watershed (Table 8). These results suggest that processes that influenced cutthroat trout demographics in tributaries in the upper Benewah watershed were operating similarly and contributing to an overall increase in juvenile abundance, whereas those that influenced abundance in the lower reaches may be operating independently from one another. In contrast to Evans and Benewah creeks, a watershed-scale trend in cutthroat trout abundance in Lake Creek was not detectable over this time period, and reach trajectories did not exhibit similar patterns of change over time (Table 8). For example, whereas densities in the Bozard tributary generally increased from 2003 to 2007, densities in the lower and upper reaches in the West Fork Lake tributary were respectively decreasing and high variable over the same time period (Figure 6). This suggests that processes regulating juvenile cutthroat abundance may have been operating independently from one another in sampled reaches in the Lake Creek watershed.
Figure 6. Depletion removal estimates (fish/100 m) of age 1 and older cutthroat trout for four reaches in the Bozard and West Fork drainages in the Lake Creek watershed, 2003-2009.
The positive trajectories in cutthroat trout abundance observed in both Evans Creek and tributaries of the upper Benewah watershed may in part be explained by a recent, regionally favorable environment where basin-wide stream conditions were conducive to spawning success and increased survival rates of early life stages. Though the lack of a detectable similar watershed-scale trend in Lake Creek is not consistent with such an explanation, tributary densities in Lake Creek may be approaching carrying capacity with not much potential for further increase. Concordant population abundances, indicative of regional climatic influence, have commonly been reported for small salmonid stream in other regional networks (Platts and Nelson 1988; Gowan and Fausch 1996). On the other hand, the observed trend in cutthroat trout abundance in upper Benewah may have also been a collective response to the large-scale habitat restoration and the aggressive brook trout suppression program that have proceeded in upper Benewah reaches since 2004, given that the abundance trajectory in Benewah Creek exhibited a more linear profile than that in Evans Creek, a watershed that has received minimal management intervention in recent years. As additional years of data are collected, further comparisons among watersheds will allow us to better evaluate whether population responses are the result of our remedial actions.
Table 8. Summary of repeated measures analysis for series of standardized depletion estimates and first pass catch to detect trends in age one and older cutthroat trout over the years 2003-2009.
Figure 7. Depletion removal estimates (fish/100 m) of age 1 and older cutthroat trout for six reaches in the Evans Creek watershed, 2003-2009.
Figure 8. Depletion removal estimates (fish/100 m) of age 1 and older cutthroat trout for five tributary reaches in the upper Benewah Creek watershed, 2003-2009.
Though multipass-depletion estimates are useful for examining site-specific temporal trends, the large degree of within-year variability among site estimates that has commonly been documented in our surveys does not permit a reliable examination of abundance when estimates are expanded to larger spatial scales (Firehammer et al. 2009). Because of this shortcoming and the desire to increase sampling efficiency, an index of site abundance would be preferable to an absolute estimate, providing that the index tracks true abundance over time. As such, a study was conducted in 2009 at 23 of our sites, which varied in salmonid abundance, to examine the predictive abilities of a single-pass index. Age 1+ fish were marked and released at each site during an initial pass (marked fish ranged from 2 to 78), and the following day the site was re-sampled using our multipass-depletion removal protocol. Depletion estimates for marked fish were generated and compared to the actual number of marked fish released, and the precision of the relationship between marked fish captured during the first removal pass and known marked fish released at each site was examined.
A strong linear relationship was detected between numbers of marked trout recaptured in the first depletion pass and those released the day before across sampled sites (r = 0.95). Others have also found single-pass indices to perform well in predicting abundances for salmonid populations in small-streams (Jones and Stockwell 1995; Kruse et al. 1998; Bateman et al. 2005). More importantly, we found that depletion estimates underestimated the true abundance, primarily as a result of an overestimation of capture probability during subsequent passes, which was consistent with other studies that documented biases associated with depletion-removal estimates for salmonids in small stream systems (Peterson et al. 2004; Rosenberger and Dunham 2005). Results from our repeated measures trend analyses also indicated that first pass catch data provided similar interpretations of watershed-wide abundance trends in cutthroat trout as did our removal-depletion estimates (Table 8). These results lend support to using first-pass catch rather than multi-pass depletion estimates to examine long-term trends in our watersheds, and consequently, since 2010 we only conduct single passes. Moreover, because of the reduced effort associated with single-pass efforts, we intend to expand our summer surveys across a greater percentage of our watersheds to better understand salmonid demographics.
Barrier removals have been implemented in several locations recently as a priority for reconnection of isolated habitats and blocked tributaries, which has been demonstrated to provide a quick biological response, is likely to last for many decades, and has a high likelihood of success (Pess el al. 2005; Roni et al. 2008). The first of these projects, completed in 2004, was a culvert replacement at the confluence of Windfall Creek and Benewah Creek (RM 11.5) to restore fish passage for adfluvial westslope cutthroat trout to 4,344 meters of high quality spawning and rearing habitat (Contract 10885/no WE reference). Hydraulic analysis indicated the old 122 cm diameter pipe was a barrier for all flowrates during the migration period due to excessive leap height and velocity. The old pipe was replaced with a 221cm x 160cm pipe-arch placed below grade and lined with natural stream substrate. Tailwater control at the outlet of the culvert was created by constructing a series of riffles in a 200 m reach of Benewah Creek downstream of the outlet. This had the effect of reducing channel entrenchment and increasing rearing habitat capacity. Approximately 28 m3 of large wood was placed in the treatment reach to increase roughness in overbank areas and provide instream habitat complexity. Figure 9 shows the difference in longitudinal profile and wood frequency before and after restoration activities were completed. The LWD volume was increased from 0.057m3/100 m to 5.59m3/100 m. Mean residual pool depth increased from 0.41 m to 0.78 m. Bank height ratio, the ratio of total bank height to bank full height, was reduced by 54% and estimated stream bank erosion rates and sediment yield were reduced by 47% and 69%, respectively.
Figure 9. Comparison of channel bed form and large wood frequency before and after restoration for a site in Benewah Creek.
An additional fish passage project was conducted on the North Fork Alder Creek where Tribal staff identified a stream crossing as a complete barrier in 2005 (Contract 10885/WE E175). The existing stream crossing, which consisted of logs and fill, was replaced with a 11.5 m x 4.4 m x 3 m Horizontal Ellipse CMP culvert. Construction for the project was completed in June -July 2006. This project restored connectivity with the upper North Fork Alder Creek watershed and opened up 2,469 m of high quality rearing and spawning habitats upstream of the new culvert. The new culvert allows for passage of all size classes of westslope cutthroat trout. The crossing is more stable and less susceptible to erosion. Flood flows can pass through the culvert instead of being blocked and forced over the road surface, effectively eliminating the road as a sediment source to the stream channel.
Several recent projects have been implemented to add coarse wood to discrete stream reaches where deficiencies in instream wood have been identified and where recruitment processes have been impaired by past management. Large woody debris structures were added to a site in Evans Creek in October 2005 with the objectives of increasing pool habitats, accumulating spawning substrate and providing enhanced cover opportunities for fish (Contract 10885/WE H29). This project involved placing 4 MBF of natural wood and 16 ELWDTM (Type 20 N) structures along 152 m of Evans Creek. Approximately 44 pieces of natural wood were placed on the site, these consisted of pulp logs that came in a variety of sizes as large as 10 m long and 0.6 m in diameter. The ELWdTM structures were formed from eight smaller diameter logs to form structures that were approximately 63-68 cm in diameter and 6 m long. Habitat data was collected for the site from before and after wood additions. The density of large wood increased by 256% from 4.11 m3/100 m in 2005 to 14.63 m3/100 m in 2006. Much of the 2005 wood density was due to a single large rootwad that had a volume of 3.97 m3. This rootwad moved off the site in 2006. It was found that localized scour of the bed surface occurred in conjunction with placement of the ELWdTM structures during the first year following implementation. However, any changes in pool metrics attributed to restoration were transient and we did not observe significant changes in either pool depth or frequency relative to a control site when comparing pre-treatment and post-treatment data. Though trout densities were very similar in lower Evans creek from 1996 to 2002, extremely different trends were observed from 2003 to 2009 between the treated reach and nearby control reaches located upstream and downstream of the project (Figure 10). Prior to restoration, from 2003 to 2005, the mean density of cutthroat trout at the treated site was 12.8 fish/100 m. After restoration in 2005, mean density over the years 2006 to 2009 increased dramatically to 93.2 fish/100 m. Conversely, over the same time periods, mean densities decreased from 48.3 to 32.3 fish/100 m at a downriver control site, and from 30.8 to 21.1 fish/100 m at an upriver control site. Evidently, the ELWdTM structures provided important habitat at the treated site and pool depth, as intended to be created with the addition of the ELWdTM structures, may not be as important in creating suitable rearing habitat in Evans Creek as in our other systems. One explanation is that water temperatures in the Evans Creek watershed are not as limiting as temperatures found in Benewah Creek. For example, water temperatures at Evans site 3 exceeded 17° C less than 2% of the time compared to approximately 50% of the time in Benewah mainstem sites near 9-mile bridge in 2006 (Vitale et al. 2008). Thus, the thermal refugia that have been observed in deep restored habitats in the upper Benewah watershed may not be as critical for cutthroat trout in Evans Creek.
In 2007, a instream restoration project was completed on Whitetail Creek, a tributary to Benewah Creek (Contract 33533/WE I29). The objectives of the project were to to increase habitat complexity, increase channel stability, reduce bank erosion, and increase the frequency of overbank flooding by adding large wood to the stream channel. A total of 305 m of stream channel was treated. Approximately 20 MBF of wood was used to create single and multiple log structures for this project. Portions of the logs were buried below the predicted depth of scour to act as anchors for the structures. Other logs were placed along and across the stream in different configurations to form bank protection structures and dams. Twenty structures were built. Eroding stream banks were reshaped in areas where structures were placed in order to form new bankfull benches. Prior to construction wood volumes for the project reach was 1.54 m3/ 100 m. One year post construction saw a wood loading of 11 m3/ 100 m.
Figure 10. Density estimates and associated 95% confidence intervals for cutthroat trout at restored site 3 and unrestored sites 2 and 4 in lower Evans Creek, 1996-2009. In-channel habitat enhancement occurred at site 3 in fall 2005 after fish sampling occurred (depicted by arrow). The accompanying photo shows juvenile cutthroat trout using ELWd™ structure as cover.
Since 2005, much of the restoration effort for this project has been directed at recovering a suite of watershed processes based on increasing the connectivity of the channel and floodplain and restoring native plant communities for a 5.1 km reach of upper mainstem habitats in the Benewah Creek watershed, with the downstream end of the reach located 14.3 km from Coeur d’Alene Lake. This reach was prioritized, in part, based on the measured deviation from historic and reference conditions for several habitat, water quality and landscape elements (e.g., wetland loss, channel stability, riparian conversion), and its proximity to intact habitats and source populations in the upper watershed (Vitale et al. 2002). The implementation of this larger reach scale project is consistent with the multispecies analytical approach described by Beechie et al. (2008) in which landscape functions at the scale of species and ecosystems are prioritized for restoration based on the degree of impairment to processes and/or rarity of habitat types.
In this reach, the historical engagement of flood flows on the valley floor was most likely in response to both (i) blockage effects of large wood pieces falling into the channel and aggregating smaller wood, and (ii) beaver dams, with local gravel and fine sediment accumulations upstream. Following removal of the valley forest, beaver trapping, and 70+ years of cattle grazing, the effective flood level control provided by flow obstructions and the associated upstream gravel accumulations was likely removed, resulting in less frequent and shorter duration inundation of the valley floor during snowmelt and runoff events compared with pre-settlement times. In addition, impacts to the former riparian forest, which provided root cohesion, resulted in reduced stability of stream banks and a general unraveling via widespread lateral bank failures and channel avulsions throughout the course of Benewah Creek. Hydraulic analysis of representative channel cross-sections through this degraded reach show the overall level of incision/enlargement is approximately equivalent to the capacity of a 5-year return interval peak flow event, with some areas exhibiting channel capacity that approaches the 10-year peak flow. Implementation has proceeded with the objective of recovering a more stable channel and floodplain geometry by restoring natural fluvial geomorphic processes and riparian vegetation that allow for channel migration without incision. During the first phase of implementation (2005-2008), the design took the approach of filling the stream channel to historical elevations and utilizing historical alignments where possible (Contract 10885/no WE reference). In areas that laterally expanded following entrenchment, new banks and floodplain were created. Excavation to enhance channel planform was generally not employed, except in areas where deposited sediments occluded abandoned channel segments that were reactivated. The designed planform creates channel grade and profiles within the range of what is believed to be historical conditions, based on topographic and field analysis. A second phase of implementation (2009-2012) takes an approach involving minimal in-channel work and a reliance on beavers and beaver assist structures to aggrade the incised stream channel over time (Contract 37842/WE E175). Discrete segments of relict channels were reactivated where these opportunities existed, but more importantly, in-channel structures were constructed to facilitate overbank flooding in key areas to support establishment and growth of native plant communities across the valley bottom and to help reinforce a more stable complex of natural beaver dams.
A total of 2,523 m of channel was constructed between 2005-2008, and changes in response variables are summarized in Table 9 using a combination of before/after and treatment/control comparisons from monitored sites (Contract 10885/WE G30). Restoration activities have increased channel length by 506 m, resulting in an overall 25% increase in sinuosity from 1.28 to 1.68. Slope deceased by 58% from 0.0048 pre-construction to 0.002. Mean residual pool depth increased significantly (p <0.001) from 0.57 m pre-construction to 1.18 m and mean low-flow thalweg depth also increased significantly from 0.38 m pre-construction to 0.52 m (p<0.0167) (Figure 11). Pool volume increased by 41% from 155 m3/100 m to 218 m3/100 m. Instream large wood volume increased 143% from 3.15 m3/100 m pre-construction to 7.67 m3/100 m. For some constructed channel segments, the increase in wood frequency and volume was even greater. Changes in stream bank erosion rates were estimated for treated and untreated control sites using the BANCS model (Rosgen 2006), which combines quantitative measures of stream bank characteristics with derived values of near-bank sheer stress to generate estimates of average annual erosion rates. The control site was characterized by unstable stream banks with accelerated erosion rates and increased sediment yield to the channel; 30% of stream banks showed active erosion with erosion rates of 0.7 metric tons/year/m. Restoration efforts have significantly improved stream bank conditions to reduce erosion potential (Photo 3). Significant response variables include the bank height ratio, which was reduced by 50%, and the rooting character (e.g., root density and depth) of stream bank vegetation. We estimate that erosion rates have been reduced by 73% with a reduction in total sediment yield of greater than 1,294.6 metric tons/yr for the 2,523 m of channel that has been treated to date. Active bank erosion was evident at 10% of stream banks 2 years post-restoration, a reduction of 65% compared with the untreated control. A mix of 23 native plant species, including more than 78,000 herbaceous plants and 35,000 woody trees and shrubs have been planted in 7.2 hectares of valley bottom floodplain influenced by the project (Contract 10885/WE J47, WE K47). In these areas, the extent of wetland habitats has been increased by 48% and wetland function has been improved over a broad range of indices. Improvements in functional capacity are most likely attributable to the increase in hydrologic interaction between the restored Benewah Creek and it’s floodplain, with the greatest improvements evident in maintaining detrital biomass, dissipation of energy, sediment and nutrient retention/removal, and dynamic and long term surface water storage. Mean depth to groundwater during summer base flow, as measured at shallow groundwater wells (N=10) in 2008, indicate much higher water levels in restored reaches (mean = 0.62 m) compared with untreated controls (mean = 1.32 m). Together these changes reflect a significant improvement in the quantity and quantity of instream habitats available to native fishes as well as an improvement in the geomorphic characteristics often correlated with increased biological productivity and associated with ecological restoration.
Photo 3. Comparison of representative stream bank and channel conditions in restored (A) and untreated (B) mainstem reaches of Benewah Creek.
Figure 11. Box plots comparing residual pool depth and low-flow thalweg depth pre-construction in 2005 and 1-year post-construction in 2006. The horizontal lines within the boxes are median values, the upper and lower edges of boxes the central 50% of the distribution, and the whiskers the highest and lowest values, including “outliers” (asterisks). Median values are significantly different (p < 0.0167).
Table 9. Summary of change for selected response variables following restoration in Benewah Creek.
More recently, our monitoring of natural beaver dams in the upper 3 km reach of the Benewah Creek mainstem, beginning in fall 2008, greatly influenced our approach during the second phase of restoration (Contract 47583/WE W157). Our surveys indicated that only 26% of the dams appeared to be built with or upon stable materials such as large wood; most of the dams were built with small alder pieces (Vitale and Firehammer 2011). Because of the small size of dam-building materials, in combination with the entrenched nature of the reach and the lack of other large wood to attenuate current velocities, many of the dams were either compromised or destroyed during ice breakup and peak flows. Notably, of those dams that tended to persist, most were located in areas with a proximate relatively intact riparian forest and the presence of large wood in the channel (Figure 12). Though dams tend to be rebuilt during late summer and early fall periods, their lack of stability precludes the consistent availability of deep pool habitat for cutthroat trout during both critical overwintering and warm, mid-summer rearing periods. Furthermore, the lack of intact structures during spring runoff does not provide the mechanism that will consistently promote the engagement of spring flows with floodplain habitats and facilitate restoration of a riparian forest.
Figure 12. Mean change in dam height with associated 95% confidence intervals from the fall 2009 to the spring 2010 survey (left panel), and the mean height (± one standard deviation) of dams surveyed during the spring of 2010 (right panel). Circle, squares, and triangles represent three discrete reaches, where reach 2 (squares) is laterally bounded by relatively intact riparian forest and exhibits relatively higher large woody debris loading.
We developed our natural analog approach for beaver assist structures based in part on the surveyed characteristics of natural dams, using an arrangement of large logs to create backwater effects and flow constriction to allow for more frequent and extensive floodplain connection during annual floods (DeVries et al. 2011 In Press). Structures were sited at strategically selected locations to facilitate connection of key floodplain swales during high flows. This approach was conceived as an adaptive application, where additional structures may be identified for construction based on future monitoring of the present structures. Because we do not know the best approach a priori, we conceived two alternative types of engineered flow choke structures with different means for upstream water surface elevation control. Both designs involved constructing log “walls” with the appropriate hydraulic constriction to back up water to the floodplain level at approximately the target bankfull flow (Photo 4). The structures extend downwards sufficiently to account for predicted scour depths, and extend into the floodplain sufficiently to prevent the stream from accomplishing an end-run around the structure. The sill elevation of the structures was designed to emulate general low flow control elevations formed by numerous beaver dams present in the reach, where the median depths of dams were 0.35 m at the riffle crest and 0.98 m below the floodplain. We also conceived a non-engineered approach involving placing 2-4 large logs in the channel to provide a key building block to aid beavers in dam construction. This was based on observations that the most persistent, existing dams throughout the Benewah Creek stream corridor are built with mountain alder keyed into remnant in-channel large wood. MacCracken and Lebovitz (2005) found that this technique can work under specific circumstances, when the channel is unconfined with a wide floodplain, there are no logjams nearby, and there are deep pools and banks suitable for dens nearby. The objective of this approach is to assist the beaver in constructing new dams by supplying them with foundational dam material. Additionally, fresh black cottonwood, Aspen saplings and conifers have been placed along the stream banks and in the channel to encourage beavers to finish the dam construction. It has been demonstrated that beaver will use saplings placed along stream banks for dam construction (Muller-Schwarze and Sun 2003).
Photo 4. Two types of flow choke structures were built, one with a combined orifice and weir (a), and the other with a simple contracted weir (b). Both structures back water upstream during high flow and are strong enough to withstand ice jams.
Between 2009 and 2011, we built 9 flow choke structures within the active channel - 4 additional structures were built in side-channel habitats and in channels that will be activated in the future - and we used a simpler approach to reinforce natural beaver dams and/or provide beaver assist structure in 7 additional locations (Contract 42560/WE D30). These structures influence 797 m of stream habitats at low flow through backwater effects, and provide increased connectivity to the valley bottom floodplain for about 2.1 km (70%) of the project reach. Importantly, from a riparian floodplain restoration perspective, we have documented overbank flows across the valley bottom at discharges equal to about the 1.5 year return interval flood in reaches associated with more stable natural dam complexes and in the vicinity of our structures (Photo 5). Other reaches require much higher discharge for overbank flow. Recovery of beaver-generated floodplain wetlands and their wet meadow, scrub-shrub and forested plant communities depends upon restoring lost hydraulic linkages between the channel and its floodplain (Westbrook et al. 2006). Characteristic riparian floodplain vegetation depends on annual flood-pulses and a locally high water table. We note that the choke structures were not designed to increase summer pool habitat directly over current conditions. In contrast, natural beaver dam building significantly increases the amount and depths of pool habitat in Benewah Creek. We have observed, however, that most dam building activity appears to occur later in the summer, which leads us to suggest that thermal refugia and habitat cover typically associated with deeper pools and increased trout abundance (e.g., Ebersole et al. 2003; Firehammer et al. 2010) is currently less available during the warmest mid-summer periods. The loss of unstable dams during high flows and ice breakup may also contribute to poor overwinter survival in mainstem habitats because both juvenile and adult cutthroat trout are known to use deep pools as winter refuge habitat in small stream systems (Jakober et al. 1998; Brown and Mackay 1995; Harper and Farag 2004; Lindstrom and Hubert 2004). In instances where flow choke structures have replaced less stable natural dams, the effect has been to increase residual pool depth by an average of 0.33 m and increase pool area by 141%. In addition to the above mentioned structures, approximately 48 cubic meters of wood (80 20-33 ft. long logs), primarily aspen and conifer logs, has been added to the stream channel and near bank region within a 700 meter reach to aid beavers in dam construction and increase wood loading to approximate a target wood loading of 6-9 m3/100 m for mainstem and tributary habitats in the watershed. Collectively, the approaches to channel wood additions that have been implemented most recently allow for more frequent and extensive floodplain connection during annual floods, increase deep pool habitats associated with improved summer and winter rearing, and is a natural analog alternative to large scale riffle construction that maintains connectivity with cooler groundwater during summer months.
Photo 5. Over bank flows in discrete channel segments of upper Benewah Creek are initiated at the 1.5 year return interval flood (168 cfs) in areas that are associated with engineered structures that have been constructed in the channel, as well as with stable, persistent beaver dams, large wood aggregations and intact riparian forest.
In combination with the in-channel work described above, restoration of riparian plant communities has proceeded in floodplain habitats throughout the reach, and especially in areas where project work is resulting in more frequent overbank flows (Contract 42560/WE E47, F47). A primary strategy being utilized for floodplain restoration is the utilization of black cottonwood’s unique life history characteristics to rapidly “flip” or change the current degraded riparian ecosystem into a diverse self-sustaining riparian forest. Although black cottonwood’s regenerative strategy (seedling establishment on bare alluvial substrates and branch fragment vegetative propagules) likely resulted in it historically playing a non-dominant role in the riparian forest, its life history characteristics make it ideal for rapidly establishing a complex riparian forest. The planting restoration design calls for establishing a matrix of floodplain cottonwood and other woody shrubs, interplanted with understory cedar, Engelmann spruce and pine species. Cottonwood will establish a closed canopy within about 5 years and act as nursery cover for establishing understory conifers. Cottonwood break-up will occur at about 60-90 years, relinquishing understory conifers to a dominant canopy position. This technique has been used successfully with cottonwood and western red cedar in trials in British Columbia (Peterson et al. 1996). From 2009-2011 a total of 59,053 herbaceous plants and 20,953 woody plants representing 26 species were planted to treat 9.45 hectares of floodplain habitats and 2.85 km of stream bank. In much of these areas, invasive reed canarygrass (Phalaris arundiacea) that had become established was mechanically removed from planting areas prior to treatment. The establishment of an interior forest micro-climate following canopy closure will provide significant enhancement of fish and wildlife habitat throughout the Benewah Creek valley riparian ecosystem. Specifically, the new riparian forest will provide for maintenance of habitat interspersion and connectivity, reflecting the capacity of a wetland to permit aquatic organisms to enter and leave the wetland via permanent or ephemeral surface channels, overbank flow, or unconfined hyporheic grave aquifers, and access of terrestrial or aerial organisms to contiguous areas of food and cover (Jankovsky-Jones 1999). The forest will support enhanced fish habitat through stream shading, allochthonous input of fine, coarse and organic carbon to the aquatic ecosystem, and input of large wood to the stream channel.
Another major stream and wetland restoration project was recently completed on the WF Lake Creek between 2009-2011 (Contract 37842/WE F175). The project treated 762 m of WF Lake Creek and 305 m of an unnamed tributary. The project reach was an incised section of stream channel that had been straightened and ditched prior to 1937. The stream reach had severe bank erosion, lack of large woody debris, low riparian plant diversity, and a confined floodplain (Photo 6). Flood flows were concentrated in the channel, located 4-6 ft. below the valley bottom, and rarely able to access the historic floodplain. The restoration approach involved filling 610 m of the existing incised channel and diverting flows into a newly constructed 922 m long channel that is well connected with the valley bottom to allow dissipation of flood flows over a broad, vegetated floodplain. New stream habitat was constructed over the channel subgrade using imported gravels and logs to create streambed and streambanks (Photo 6). Rock was placed in the channel in combination with large wood to form riffles and pools. The seasonal stream was also filled to repair the degradation that had occurred as headcuts from the incised mainstem migrated headward over a period of several decades. Goals for this project included: 1) create wetland habitats and increase hydraulic connections with the valley bottom; 2) reduce bank erosion; 3) provide a long-term source of large woody debris for natural recruitment; and 4) provide measurable increase in abundance and distribution of westslope cutthroat trout.
Photo 6. WF Lake Creek before (2008) and after (2011) restoration treatments were applied to address severe channel incision and bank erosion stemming from historical channelization of the stream.
A comparison of response variables for pre/post construction is summarized in Table 10 for the site. Restoration activities have increased channel length by 312 m, resulting in an overall 51% increase in sinuosity from 1.13 to 1.71. Slope decreased by 19% from 0.0047 pre-construction to 0.0038. Restoration efforts have significantly improved stream bank conditions to reduce erosion potential. Bank height ratio (the ratio of total bank height to bankfull height) was reduced by 75% from 4.37 to 1. A mix of 23 native plant species, including more than 20,199 herbaceous plants and 11,566 woody trees and shrubs have been planted in 3.64 hectares of newly created floodplain, increasing the plant diversity on site (Contract 42560/WE H30, I47). The extent of wetland habitats has been increased by 302%. Together these changes reflect a significant improvement in stream and riparian processes that should translate into improved quantity and quantity of in-stream habitats available to native fishes.
Table 10. Summary of change for selected response variables following restoration in WF Lake Creek.
Temperature monitoring in mainstem reaches of the upper Benewah watershed have revealed the creation of thermal refugia that were the result of our large-scale channel restoration activities. Sequences of temperatures, collected in riffles and in the deepest part of adjacent upstream pools, have been measured continuously along mainstem reaches during mid-summer periods before and after their restoration. Before restoration, most pools in upper Benewah mainstem reaches were less than 1.0 m deep and generally were not more than 0.5°C cooler than their associated downstream riffles (Figure 13). However, in the reach of the mainstem that underwent channel reconstruction in 2005 and 2006, post-reconstruction pools were typically greater than 1 m, and stream temperatures measured along the bottom of these pools were frequently between 2 and 5°C cooler than ambient riffle temperatures. Pools in the 2007 restoration reach were also generally deeper after than before channel construction, with temperature differences ranging between 2.5 and 6.5°C during the post-restoration survey. In summary, cool-water refugia were more prevalent in reaches after than before large-scale channel restoration, apparently created by the concomitant deepening and lengthening of pool habitats during the process of streambed elevation within the designated riffles. The creation of these refugia should increase the availability of suitable rearing habitat for WCT in mainstem habitats of the Benewah watershed (Torgersen et al. 1999; Ebersole et al. 2001, 2003).
Figure 13. The relationship between temperature difference and residual pool depths for surveys conducted above 9-mile bridge in the upper mainstem of Benewah Creek along reaches that were restored in 2005 and 2006 (top panel) and in 2007 (lower panel). Temperature difference was calculated as the temperature measured along the pool bottom minus the temperature measured in the associated downstream riffle. Years in which surveys were conducted are identified in parentheses.
Despite the mosaic of thermal refugia and the complex habitat (e.g., deep pools and LWD additions) that have been created in reaches of the upper Benewah mainstem that had been restored from 2005 to 2008, we have yet to see direct evidence of a significant response by cutthroat trout. Various explanations have been proffered for the apparent lack of utilization of these restored habitats, which have been described in detail in previous annual reports (Firehammer et al. 2009, 2010). Briefly, these include, but are not limited to, the following: (1) a sufficient degree of isolation between core rearing tributaries and restored mainstem habitats, mediated by distance or other physic-chemical barriers (e.g., temperature), that inhibit dispersal (Bond and Lake 2003; Pretty et al. 2003); (2) insufficient tributary densities to induce density-dependent emigration into these habitats (Johnson et al. 2005; Shrank and Rahel 2006); (3) a lag in positive fish response because of the repeated, acute artificial disturbances imposed by channel reconstruction on ecological and hydrological stream properties over the four years of restoration; and (4) the persistence of limiting factors in reaches adjacent to those restored (Moerke and Lamberti 2003; Cowx and Van Zyll de Jong 2004). We realize that because we are not only amending local deficiencies in habitat complexity but also addressing impaired processes that operate at larger spatial scales, the re-establishment of natural processes will occur gradually, and as such, detection of positive responses by cutthroat trout may require a longer timeframe. As we progressively address contiguous reaches in the upper Benewah mainstem with Phase 2 implementation, we expect to continue to increase the extent of favorable rearing habitats that are conducive for cutthroat trout colonization and growth.
Another explanation for the absence of cutthroat trout in restored habitats, which has not been adequately tested, is our inability to capture fish using our current sampling techniques. Given the thermal refugia that have been observed at the bottom of deep pools in restored reaches, cutthroat trout, if present, would most likely be using these micro-habitats. However, restored pools are frequently over 4 ft deep, and not only is visibility poor but both wading and netting prove challenging at these depths. Furthermore, because of the low conductivities in our watersheds, the electrical fields generated by our backpack electrofishing equipment are exceptionally small and consequently may not elicit electrotaxis in fish lying along the bottom. Currently, we are experimenting with other gear types (e.g., fyke nets) to evaluate whether cutthroat trout are using deep restored pools as summer rearing habitats.
Though a direct numerical response to restoration has not been observed in mainstem reaches, the significant increase in cutthroat trout densities in tributary habitats demonstrated by our trend analysis may suggest an indirect response to restoration. Deepened mainstem reaches may have provided suitable overwintering habitat that was available only in a limited capacity before restoration. Both juvenile and adult cutthroat trout have been found to prefer deep pools as winter refuge habitat in small stream systems (Jakober et al. 1998; Brown and Mackay 1995; Harper and Farag 2004; Lindstrom and Hubert 2004). In addition, cutthroat trout have been found to respond positively to improvements to winter refuge habitat. Solazzi et al. (2000) found cutthroat trout abundance to increase, presumably owing to higher overwinter survival rates, following the creation of winter habitat for salmonids in coastal Oregon streams. In addition, Roni and Quinn (2001) found higher densities of cutthroat trout at sites with experimental large woody debris additions than at control sites, but only during winter and not summer sampling. Evaluating the winter distribution of cutthroat trout in upper Benewah mainstem habitats may reveal benefits of our channel construction activities that were not realized from summer surveys. In order to perform such an evaluation, cutthroat trout captured in tributaries during summer and fall electrofishing surveys will be PIT-tagged and their movements monitored throughout the fall and winter using strategic placement of antenna arrays in mainstem habitats. A more detailed description of this methodology is provided in the proposed deliverables section.
Non-native interactions in stream environments
A brook trout control program was initiated in 2004 to suppress the numbers of brook trout found in main-channel and tributary habitats in the upper portion of the Benewah watershed. However, unlike other brook trout removal projects that have focused on eradication and subsequent preventative recolonization measures, such as passage barriers (Shepard et al. 2003), our approach was tempered by the desire to maintain connectivity with the lake to promote the migratory life-history variant of our cutthroat trout population and its concomitant high productivity potential. We felt that the benefits of unimpeded access and the expression of the cutthroat adfluvial life-history greatly outweighed the benefits of brook trout eradication in isolated tributaries (Peterson et al. 2008a). Further, eradication and subsequent barrier installation have not always proven entirely successful (Thompson and Rahel 1998), and, within our watershed, would require large-scale chemical treatments and an extensive trapping and hauling program to supply migratory adult cutthroat trout to the various isolated spawning tributaries. Our control strategy entailed annually removing fish before fall spawning periods by conducting single-pass electrofishing efforts through contiguous mainstem reaches upriver of 9-mile bridge and in tributaries that supported relatively high densities of brook trout. Numerical responses in brook trout to our efforts were examined at a 2.0 km main-stem index reach that has been consistently targeted in each year, and at our tributary index sites in the upper watershed.
From 2004 to 2011, approximately 8000 brook trout have been removed from the upper reaches of the Benewah watershed. Over the first three years of the suppression effort, numbers of fish removed increased from 601 to 2405, in large part due to the progressive targeting of additional mainstem river kilometers rather than just tributary reaches (Figure 14). Not only were higher densities of fish found in mainstem reaches (most notably from the 12-mile bridge to the confluence of the upper Benewah forks) than in tributaries, but fish were also generally greater in length (Vitale et al. 2008, 2009). The increase in the percent of mature adults removed from 26% in 2004 to 55% in 2006 also reflects the spatial re-distribution of our suppression efforts. Since 2006, numbers of brook trout removed from the upper watershed have steadily declined (Figure 14). Although the decline may partly be explained by the large numbers of fish removed during the early years, the low numbers of fish removed since 2009 were largely due to reduced efforts applied to mainstem reaches. Notwithstanding the reduced effort in recent years, both numbers of brook trout and CPUE (fish removed / seconds of shock effort) have steadily declined in the 2.0 km mainstem index upriver of 12-mile bridge (Figure 14). A significant overall reduction in brook trout densities across upper Benewah tributaries, however, has not been able to be detected. The lack of a measurable reduction across tributaries is likely explained by the differences in trends observed among the monitored tributaries. Whereas densities generally remained at low levels in Whitetail Creek and the South Fork since 2004, they declined substantially in the West Fork, but displayed increasing and variable trends in Schoolhouse and Windfall creeks (Figure 15).
The differences in trends observed across tributaries may be attributed to one or more of several factors including the proximity to colonizing sources, changes in reach accessibility, and varying degrees of effort applied in previous removal activities. First, the location of Schoolhouse and Windfall creeks in the upper part of the watershed may in part explain the positive trends observed in both tributaries. The mouths of both creeks are located along the mainstem reach where densities estimated during removal efforts have consistently been found to be the highest, thus increasing the probability for mobile individuals to colonize these tributary reaches. Others have noted the importance of both proximity and connectivity to source localities in determining probabilities of brook trout establishment (Benjamin et al. 2007). Brook trout expansion into Windfall Creek, however, was likely inhibited until 2004 when culvert replacement virtually eliminated this barrier. Thus, local sub-populations, colonized by the more mobile individuals, may not have yet had the opportunity to become firmly established in Windfall Creek (Peterson and Fausch 2003), which may partly explain the variable densities observed in this tributary over the last four years. As a result of the recent re-connectedness of Windfall Creek with the mainstem, this tributary should continue to be monitored in the future to assess rates of brook trout expansion into this newly accessible habitat. Additionally, the differences observed among tributaries may have been due to the focus of removal efforts during the first couple of years. Initially, before it was discovered that many of the larger adults were residing in upper mainstem habitats, efforts were concentrated in tributaries, most notably the South and West Forks. Given that the most marked decrease in abundance was demonstrated in the West Fork, the unequal distribution of past sampling efforts may partly explain the results from our survey data.
Figure 14. Number of brook trout removed from the upper Benewah watershed and from an index mainstem reach in upper Benewah in addition to the CPUE (fish removed / shock sec) of brook trout in the index reach, 2004-2011.
Figure 15. Depletion-removal estimates (fish/100 m) of age one and older brook trout for five tributary reaches in the upper Benewah Creek watershed, 2003-2009.
Though a tributary-wide appreciable decline was not detected in upper Benewah, a comparison with the neighboring Alder Creek watershed suggest that our suppression program has been effective at regulating numbers of brook trout at a manageable level. Overall trends in the upper Benewah watershed have yet to display trajectories that would project densities similar to those observed in Alder Creek (Figure 16). In most reaches, present densities are more than five times lower in the upper Benewah than in upper Alder. Watershed comparisons also may provide insight into the productive potential for brook trout in the Benewah watershed. Even before commencement of the suppression program, densities of brook trout in Alder Creek have been consistently higher than those documented in Benewah Creek. In addition, whereas distributions of cutthroat and brook trout are almost entirely disjunct in Alder Creek, suggesting probable displacement by the latter (Dunham et al. 2002), distributions of both species overlap in Benewah Creek. Differences between these two watersheds could be explained by an invasion process that is still in its incipient stage in Benewah, though given the proximity of these watersheds to each other, expansions should have proceeded at similar rates if colonizing migrants arrived from common downriver sources (Peterson and Fausch 2003). As another possible explanation, the productive adfluvial life-history strategy that is prevalent in the Benewah but not the Alder watershed may confer an advantage to cutthroat trout in the former that permits a greater biotic resistance to invasion (Griffith 1988). Differences in apparent vulnerabilities of proximate systems have also been reported by others that have examined brook trout invasions in the west (Adams et al. 2002; Dunham et al. 2002; Shepard 2004; Benjamin et al. 2007).
Figure 16. Depletion-removal estimates (fish/100 m) of age one and older brook trout for five reaches in the upper Alder Creek watershed, 2003-2009.
Alternatively, habitat conditions that are more conducive to brook trout establishment may be more prevalent in Alder than in Benewah. For example, the spatial distribution of brook trout and their habitat preferences have commonly been associated with low gradient reaches with deep, low velocity habitats (e.g., beaver ponds) that serve both as summer rearing and overwintering habitat (Chisholm et al. 1987; Cunjak 1996; Lindstrom and Hubert 2004; Benjamin et al 2007). Recent habitat surveys conducted across our watersheds have indicated that pool habitat is approximately three times as great in Alder Creek than in Benewah Creek (Miller et al. 2008). Additionally, the surveys found that 33% of the pool habitat documented in Alder Creek was formed by dams, whereas only 3% of the pool habitat in Benewah Creek was dammed. Given our current restoration approach to encourage the stability of beaver dam complexes and augment associated pool habitat in the upper Benewah watershed, we may also be increasing suitable habitat for brook trout. Continued monitoring of brook trout numbers in the upper watershed should inform whether such unintended responses are occurring.
Our suppression program also entailed monitoring changes in maturation metrics in brook trout to detect potential compensatory reproductive responses to our removal efforts owing to a release from conspecific competition. Specifically, we were interested in whether residual brook trout expressed changes in the average size at maturation or in the fecundity-at-length relationship. From 2004 to 2008, a subsample of fish was dissected to ascertain maturation status, gonad weight, and, in the case of females, fecundity. Similar data were collected from a representative sample of sacrificed brook trout from Alder Creek to obtain comparative life-history data for control purposes. Thus far, our removal program apparently has not induced compensatory responses in the brook trout population. Female brook trout were not more likely to mature at a given length in 2008 than in 2004 (logistic regression, odds-ratio = 1.403, p = 0.511). Though we did detect an increase in fecundity from 2004 to 2008 for brook trout from the upper Benewah watershed, fecundities for Alder Creek females were also comparably higher in 2008 than 2004, suggesting similar mechanisms may have been operating in both watersheds (ANCOVA; Watershed, p = 0.684; Year, p < 0.001). Though continued monitoring would better inform the potential for long-term compensatory responses, it appears that the maintenance of low brook trout densities in the upper Benewah watershed through periodic removals should not increase individual reproductive investment (e.g., increased fecundity at a given length) nor induce an earlier maturation schedule (inferred from length at maturation) that would shorten generation times. More importantly, our results illustrate the advantage of using a control watershed when evaluating the effectiveness or potential undesired impacts of a non-native removal program.
Figure 17. Cumulative distributions of total length (mm) of brook trout removed from the 2.0 km mainstem reach upstream of 12-mile bridge in the Benewah watershed in 2005 and 2009-2011.
Non-native Interactions in Lake Coeur d'Alene
As a result of the PIT-tag information, a cooperative study is currently being conducted through the Fisheries and Wildlife Resources Department at the University of Idaho to evaluate the impact of two non-native piscivores, northern pike and smallmouth bass, on cutthroat trout survival in Lake Coeur d’Alene. Cutthroat trout have been found to be a major dietary item for northern pike in earlier studies conducted on Lake Coeur d’Alene (Rich 1992), and smallmouth bass, a documented salmonid predator, have apparently increased in numbers in the last 10 years (Maiolie et al. 2010). The study will incorporate two field seasons (2012 and 2013) in which both Windy Bay and the southern end of the lake, into which Lake and Benewah creeks respectively enter, will be intensively sampled during spring periods where there exists a high potential for spatial and temporal overlap of migratory cutthroat trout and both predators. Demographic (e.g., age structure, growth, seasonal abundance) and dietary data will be collected from both predators during these repeated sampling efforts and incorporated into bioenergetic models to estimate the consumption of cutthroat trout by both species. Information gained from this study will support the development of alternative actions that may be considered for implementation to manage the fish assemblage in Lake Coeur d’Alene, or re-direct questions and uncertainties research to other potential limiting processes in the lake (Figure 18).
Figure 18. Diagram depicting alternative management actions that could be considered for implementation contingent on the findings of the study assessing the consumptive impact of northern pike and smallmouth bass on cutthroat trout during lake residence. The weight of the arrows linking study outcomes to proposed alternatives denotes the relative projected feasibility of alternative in achieving success. Two-way arrows linking proposed alternative to effectiveness monitoring denotes that monitoring will inform the implementation of alternatives under an adaptive management context.
Outreach and education activities are regularly completed in conjunction with restoration and monitoring efforts to effectively connect many thousands of people that are affected directly and indirectly to project work each year (Contract 37842/WE AA99). There are two education/outreach objectives: 1) improve awareness of Fisheries Program activities within the Reservation community to solicit support and participation in projects; and 2) provide for educational opportunities that raise awareness for natural resources issues in the local schools and communities of northern Idaho (Table 11).
Outreach activities have focused on informing the public about different projects and topics important to project work. The Fisheries Program publishes a newsletter, The Watershed Wrap, which is distributed to reservation landowners and local agencies throughout the year. This newsletter contains a variety of articles describing work being completed by the Fisheries and Wildlife programs, as well as other natural resource management efforts conducted by the Coeur d’Alene Tribe. Watershed and inter-agency work group meetings are also held to inform stakeholders about different projects and provide a forum to receive public input and solicit participation in future projects. Other outreach events that are held to engage the public include hosting a periodic speaker series and annual fishing derbies. A variety of educational activities have been completed to engage local students. The program holds two major educational events each year that collectively have more than 500 participants: Water Awareness Week and Water Potato Day Celebration. Local students participate in learning stations that focus on fish, water quality, plants, soil, wildlife, macroinvertebrates, and Tribal culture. In addition to these events, the Fisheries Program hosts summer internships for local high school students and supports undergraduate/graduate research opportunities. Currently the program is employing two seasonal technicians as they pursue their college education.
Involvement with the public is instrumental to the success of restoration work being completed by the Fisheries Program. The Tribe currently owns only 7.9% of the land area within the four target watersheds. To gain access to areas not managed by the Tribe, the program works with individual landowners and local government agencies on a regular basis. Landowner agreements or memorandums of agreements are developed between the Tribe and various landowners in order for restoration work to be completed. In order to educate the public about current and future work, landowners are contacted through letters, workgroup meetings, and personal visits. For two major watershed assessments completed in 2007 and 2008, landowner participation was required in order to access research locations to collect important data. For the Wood Recruitment Study, letters were mailed to all landowners in the study area describing project objectives and soliciting participation. Owners with controlling interest in more than 60% of the study area actively participated in the study. Two landowner meetings were held; first to describe project methods and coordinate logistics to facilitate field work, and secondly to share project results and discuss next steps. Similarly, for the road and fish passage study, letters describing the study were sent to 190 different landowners. Seventy seven percent of the ownership in the study area agreed to participate, including six major timber companies and five government agencies along with many small private landowners. Two landowner meetings were held to discuss study objectives, methods, and access issues. By engaging the public in the planning process, we ensure the success of our work.
Table 11. Summary of education and outreach activities.
Assessment Number: | 1990-044-00-NPCC-20210317 |
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Project: | 1990-044-00 - Coeur D'Alene Reservation Fisheries Habitat |
Review: | 2020 Resident Fish and Sturgeon Project Review |
Approved Date: | 10/27/2020 |
Recommendation: | Implement |
Comments: |
Supported as reviewed. Bonneville and Manager review ISRP comments and implement to the extent possible. [Background: See https:/www.nwcouncil.org/fw/reviews/2019RFS] |
Assessment Number: | 1990-044-00-ISRP-20210319 |
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Project: | 1990-044-00 - Coeur D'Alene Reservation Fisheries Habitat |
Review: | 2020 Resident Fish and Sturgeon Project Review |
Completed Date: | None |
Documentation Links: |
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Assessment Number: | 1990-044-00-NPCC-20120313 |
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Project: | 1990-044-00 - Coeur D'Alene Reservation Fisheries Habitat |
Review: | Resident Fish, Regional Coordination, and Data Management Category Review |
Proposal: | RESCAT-1990-044-00 |
Proposal State: | Pending BPA Response |
Approved Date: | 2/26/2014 |
Recommendation: | Implement with Conditions |
Comments: |
Supplemental Council recommendation (to Council Decision July, 2011): This work should accommodate all PIT Tag data generated in the Columbia River Basin, both long term and short term monitoring data, especially those data funded by Bonneville through the program. This includes tributary PIT-Tag based monitoring data currently stored in other databases such as ISEMP’s STEM database, and resident fish PIT Tag data. Furthermore, if the PERC moves forward, it would be expected that the council recommendations based on the guidance from this committee would be incorporated in this work. |
Assessment Number: | 1990-044-00-ISRP-20120215 |
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Project: | 1990-044-00 - Coeur D'Alene Reservation Fisheries Habitat |
Review: | Resident Fish, Regional Coordination, and Data Management Category Review |
Proposal Number: | RESCAT-1990-044-00 |
Completed Date: | 4/13/2012 |
Final Round ISRP Date: | 4/3/2012 |
Final Round ISRP Rating: | Meets Scientific Review Criteria |
Final Round ISRP Comment: | |
First Round ISRP Date: | 2/8/2012 |
First Round ISRP Rating: | Meets Scientific Review Criteria |
First Round ISRP Comment: | |
This proposal is truly transformational from previous work by the Coeur d’Alene Tribe. They are taking the approach that subbasin planning envisioned. This is good solid work that needs to be published; some of the principal investigators have a record of this. The CDA Fisheries project is a model for an approach for the problem. Additional sampling work may allow investigators to find out some important aspects of native trout life histories. Some telemetry work will be informative. The ISRP compliments Angelo Vitale and John Firehammer for the clear presentations and for their efforts to combine wildlife and fisheries activities, in Benewah Creek as well as in the Hangman watershed. Overall, this proposal represents excellent planning, analysis, synthesis, and progress toward the goal of restoring adfluvial westslope cutthroat trout to CDA Lake and its tributaries. The factors affecting these fish are many, ranging from large-scale landscape-level habitat processes to non-native species invasions. The investigators have done a very good job of studying each of these, or developing plans to do so, and integrating and prioritizing restoration actions to optimize management. Likewise, the outreach and education activities planned are helping local landowners understand and support the projects. Several aspects of the analysis of cutthroat trout survival and production might be improved by using state-of-the-art methods and software (Program MARK), if these are not already planned. Likewise, further consideration of brook trout invasions at a riverscape scale could yield important insights in their control. The proposal was very long (61 pages), which detracted from the review; however, many of the project findings were summarized in the proposal which is good. A number of appropriate metrics are being collected along with the habitat restoration effort, for example, adfluvial juveniles per spawner and juvenile-to-spawner survival rates. The ultimate success of the program for adfluvial trout may hinge on the ability to identify and control factors limiting survival from the juvenile-to-adult stage, such as predation by non-native fishes. The overall annual cost of the project is high relative to the eventual native fish population size, but the project is diverse with many activities and areas of focus. 1. Purpose: Significance to Regional Programs, Technical Background, and Objectives This is an ongoing project designed to address the highest priority objective in the Coeur d’Alene Subbasin: to protect and restore remaining stocks of native resident westslope cutthroat trout (Oncorhynchus clarki lewisi) to ensure their continued existence in the basin and provide harvestable surpluses of naturally reproducing adfluvial adult fish in Lake Coeur d’Alene and in Lake and Benewah creeks, with stable or increasing population trends for resident life history types in Evans and Alder creeks. This is a well-designed and well-presented proposal that systematically documents linkages to regional planning documents such as the Coeur d’Alene Subbasin Plan, past ISAB and ISRP reviews and guiding documents, and to regional strategies for recovering tributary habitats. The investigators provide excellent and detailed information about how their project relates to the Fish and Wildlife Program, and seven other programs in the Columbia River Basin. The work is clearly well integrated with current plans. Technical background in the proposal is thorough and systematic, leading logically to the proposed and ongoing objectives and actions. The proposal clearly states that the main goal is to increase production and survival of adfluvial and resident westslope cutthroat trout (WCT) to make up for lost production of anadromous salmonids. The technical background needed to understand the myriad factors that affect these WCT is almost always very well detailed. Some earlier proposals focused on using artificial production to increase westslope cutthroat trout in Benewah Creek and in Lake Coeur d’Alene without adequately considering and attempting to address limiting factors. In contrast, this proposal describes known and potential factors that appear to be inhibiting cutthroat trout production. These include sediment input from past land use practices along Benewah Creek, lack of coarse woody debris, barriers to fish movement and migrations, and competition with non-native brook trout. Strategies, objectives, and actions flow logically from this discussion and analysis. The five stated main objectives appear sound, clear, and measurable, though several will be very challenging to accomplish because of the spatial scale over which WCT complete their life cycle in this stream-lake ecosystem. Objectives include improving stream habitat, reconnecting old floodplain meadow sections, evaluation of habitat restoration actions, and reduce brook trout abundance and densities. Objectives seem well matched to the discussion of limiting factors in the proposal. The project objectives are tiered to the Intermountain Province Objectives 2A1-2A4 and to the Columbia River Basin Goal 2A that addresses resident fish substitution for anadromous fish losses (Intermountain Province Subbasin Plan 2004). Project objectives are: 1) improve stream habitats; 2) track trends in salmonid demographics and population structure; 3) evaluate effectiveness of habitat restoration; 4) address impacts from non-native introduced fishes; and 5) increase cooperation and coordination among stakeholders. Several emerging limiting factors, such as predation by non-native fishes, are objectives of the proposal. Other project objectives, such as increasing habitat complexity and connectivity, are well integrated to help ameliorate the impending changes in climate variability. No formal modeling was done, however, and would likely be premature. The proposal also includes objectives for understanding the lacustrine portion of the adfluvial westslope cutthroat trout life history and the impact that non-native northern pike may be having on the survival of WSCT, particularly during their first year outmigration into the shallow southern littoral zone of Lake CDA where northern pike are abundant. This portion of the proposal seems the least well developed at this time; however, the approach and proposed actions are again, logical and deserving of investigation. 2. History: Accomplishments, Results, and Adaptive Management (ISRP Review of Results) History: The CDA approach to management of Benewah Creek and its cutthroat trout has evolved over time and now appears to be solidly grounded in modern ecological and restoration science. A fundamental goal of the Coeur d’Alene Tribe Fisheries Program is to identify restoration and enhancement needs and opportunities in areas that have the greatest potential to improve habitat and translate into positive biological responses to recover depressed native cutthroat trout populations. The approach attempts to translate watershed analyses, resource inventories and assessments and monitoring results into the management actions needed to achieve project goals. The recent project history reflects a shift from opportunistic implementation of restoration projects to a more systematic approach for prioritizing management actions consistent with the refugia approach described by Reeves et al (1995) and Frissell and Bayles (1996) and a multispecies, analytical approach (Beechie and Bolton 1999). The approach attempts to protect the best first and expand restoration outward from areas of relatively intact habitats and populations. The multispecies analytical approach has been implemented as more detailed knowledge of factors limiting recovery have been developed. Actions focus on suites of landscape processes considered necessary to conserve multiple species. Accomplishments: The ISRP was impressed by the careful formal planning and prioritization of restoration developed in this proposal. The investigators take a highly integrated approach to understand the historical habitat conditions, and ecosystem disturbances and processes that create and sustain habitat for WCT in this basin. They integrate knowledge of ecohydrology and channel-floodplain-riparian vegetation linkages in their work, which is uncommon. From this, they develop goals for instream habitat restoration that are in line with these natural processes, such as encouraging "ecosystem engineering" by beavers to create suitable habitat for WCT. All of this is a result of accomplishments in past data collection, analysis, and further research and synthesis based on these results, which appears to have been very well done, overall. Second, it appears that the investigators have fairly recently realized that they will need a comprehensive mark-recapture program using PIT tags to develop robust estimates of production and survival of WCT by life stage, in order to understand which suite of factors are limiting their numbers and vital rates, and where in the river-lake system these bottlenecks occur. As such, we wondered whether employing a sophisticated tool like Program MARK would be most useful (see website of Dr. Gary White, Colorado State University), which can be used to estimate capture probabilities, abundance, survival, movement, and parameters like temporary emigration of fish using state-of-the-art analysis and testing methods. Third, we were impressed with the approach the investigators are using to consider effects of non-native species at riverscape and lakescape scales. Clearly, like WCT, brook trout in streams also will use habitat in a spatially dynamic way, as will northern pike and smallmouth bass in CDA Lake. Understanding these dynamics may allow intercepting the non-native fish using traps or other gear at key locations where they spawn, or past which they move, leading to more cost-effective control methods in this situation where complete removal is likely impossible. Results: This section features a nicely described logical sequence from restoration objectives (Table 1), moving through prioritizations (Table 2), into watershed functions and processes, which are tied to specific assessment techniques and procedures (Table 3). Tables 4 and 5 work through site-specific restoration actions and priorities. This is a very nice and defensible approach. For example, since 2004, 6.8 km of habitats have been made accessible through removal of passage barriers, 457 m of stream habitats have been treated with additions of coarse wood, and 6.2 km of degraded mainstem and tributary habitats and 20.3 hectares of associated floodplain have been treated through large-scale channel restoration. Although we have yet to see direct evidence of a significant response by cutthroat trout, we observed more pronounced positive trajectories in abundance in tributaries of Benewah Creek compared to the watersheds that have received less management intervention in recent years. Investigators are working to understand the entire life history of adfluvial westslope cutthroat trout in Benewah and Lake creeks. Given that recent PIT-tag data suggest that adfluvial juvenile-to-spawner return rates are exceptionally low in their monitored systems, they are placing a stronger emphasis on understanding the processes and mechanisms that are impacting the suitability of rearing habitats in Lake Coeur d’Alene. As an initial step toward this management goal, a collaborative study with the University of Idaho is currently underway to better understand whether predation by northern pike and smallmouth bass is a predominant mechanism regulating juvenile in-lake survival rates. It would be good to know what percentage of available degraded versus adequate habitat has been addressed by these activities since 2004, as a means to evaluate how far the effort has progressed. The collection of recruits per spawner (R/S) data and the change in objectives based on the low survival of juvenile to adult stage is good. The proposal has embraced the ISAB recommendation to use an Intensive Watershed Management approach, which involves use of treatment control sites to better identify factors affecting the resident fish. Adaptive Management: This project is well conceived and appears well executed. It is rich in data slides and tables, which demonstrate results from the last 7 years that feed directly into the adaptive management section. The changes made in light of new information were clearly described, including 1) developing a new understanding about how stream-riparian habitat is formed and inundated during floods, 2) adjusting removal strategies for non-native brook trout to account for their patchy distribution and vulnerability in spawning habitat, and 3) developing a new study to address potential for non-native fishes in Lake CDA to be an important limiting factor. The proposal and study are grounded in fisheries, conservation, and stream restoration literature and emphasizes data collection through monitoring in order to evaluate progress and modify, if needed, project goals and actions. This is the essence of adaptive management. Response to past ISRP and Council comments and recommendations: The authors have apparently responded to a main comment about the potential for non-native fishes in CDA Lake to reduce WCT survival. The goal of testing these effects, in part through a graduate student project, and the actions proposed based on these findings including developing new hypotheses, were clearly laid out and logical. The authors have also paid close attention to ISRP and ISAB studies and recommendations about habitat restoration, landscape and watershed scale activities, and the role of monitoring in adaptive management as evidenced by the proposal itself. ISRP Retrospective Evaluation of Results The CDA approach to management of Benewah Creek and its cutthroat trout has evolved over time and now appears to be solidly grounded in modern ecological and restoration science. The CDA Fisheries Habitat Project has considerable monitoring, evaluation and reporting associated with it. Results show progress toward overall project goals. The system in place also sets the stage well for the use of adaptive management. A fundamental goal of the Coeur d’Alene Tribe Fisheries Program is to identify restoration and enhancement needs and opportunities in areas that have the greatest potential to improve habitat and translate into positive biological responses to recover depressed native cutthroat trout populations. The approach attempts to translate watershed analyses, resource inventories and assessments and monitoring results into the management actions needed to achieve project goals. The recent project history reflects a shift from opportunistic implementation of restoration projects to a more systematic approach for prioritizing management actions consistent with a refugia approach and a multispecies, analytical approach. The approach first protects the best then expands restoration outward into other habitats and populations. Actions are focused on suites of landscape processes considered necessary to conserve multiple species. The project shows evidence of careful formal planning and prioritization of restoration activities using an integrated approach to understand the historical habitat conditions, and ecosystem disturbances and processes that create and sustain habitat for WCT in this basin. All of this is a result of accomplishments in past data collection, analysis, and further research and synthesis based on these results, which appears to have been very well done, overall. 3. Project Relationships, Emerging Limiting Factors, and Tailored Questions for Type of Work (hatchery, RME, tagging) Very well done, as described above. The Additional Relationships described in the proposal show that this project is well integrated into other mitigation and watershed projects, leading to synergistic and "value added" effects of coordination among projects. With respect to limiting factors, the sponsors recognize the importance of the low survival of the adfluvial juvenile to adult stage and are attempting to identify factors such as predation in the lake. Predation may constrain population increase. 4. Deliverables, Work Elements, Metrics, and Methods Deliverable Description: The deliverables were clearly laid out, overall. Those most clear were for 1) Habitat restoration, 3A&B) Responses to habitat restoration, 4) Non-native species control, and 5) Community outreach and education. The deliverables associated with 2) Abundance and production of WCT were less clear in some cases and might be expanded or considered further as outlined below. The project's recent (2005-present) deliverable status has an average completion rate of 94% (170 of 180 deliverables). Incomplete deliverables have generally been carried forward into subsequent contracts and have been completed in nearly all instances. Study Design: The study design was quite comprehensive, sophisticated, and well planned overall. We were very impressed with how well integrated the many components were. Specific points to consider that might improve the study results are: A. As described above, estimates of spawner abundance, juvenile production, survival in the lake, juvenile abundance, survival rates in streams, and movements among habitat types might be more fully integrated using a design that could be analyzed in Program MARK as one large integrated analysis. In fact, data from two systems (Benewah Creek and Lake Creek) might be analyzed together, even if processes differ between them, and allow data to be "shared" across systems, increasing power to detect important effects (see Saunders et al. 2011 NAJFM for such an analysis of stream trout abundance estimates). B. We were unclear about whether rainbow trout are native in this watershed, and if not, what the status of rainbow trout invasion is. Could climate change potentially trigger new invasions? Work by Clint Muhlfeld in Glacier National Park seems to be showing the potential danger of such invasions, and how management might be used to reduce them. C. Untreated controls are very useful, but it is not clear that they were selected at random. This is very difficult in such a large-scale study. However, one should describe how they were selected, how potential bias was reduced, and acknowledge that the comparison is useful but not a true treatment-control comparison. Several books like those by Brian Manly may help couch these comparisons in appropriate terms. D. We had some concerns about the use of single-pass electrofishing to estimate CPUE across stream sites. The deliverable is: DELV-2D: Indices of cutthroat trout abundance in stream reaches: Indices of cutthroat trout abundance in tributary and mainstem habitats in Lake, Benewah, Alder, and Evans creek watersheds will be annually computed employing single pass electroshocking at established 200 ft index sites. These annually computed indices will be used to track trends in cutthroat trout abundance at various spatial scales within watersheds, and to evaluate changes in the spatial distribution of cutthroat trout within mainstem and tributary reaches. The authors justify the use of single-pass sampling based on a high correlation between the number of WCT captured on the first pass and the number of marked fish released the previous day after one-pass sampling. They state that the number estimated the second day from multiple-pass sampling underestimated the "true abundance" of marked fish released, and that this is likely due to biases inherent in depletion sampling described in two papers (Peterson et al. 2004; Rosenberger and Dunham 2005). Given that no block nets were used to enclose the marked fish, might the lower number estimated the second day be at least partly due to emigration of marked fish after their release the first day? Saunders et al. (2011, NAJFM) showed that depletion estimates can be accurate, based on a similar study design using fences, and a more complete analysis. More importantly, the use of single-pass estimates as CPUE rests on the critical assumption that capture probabilities are equal across sites, years, and different crews, which may not be strictly true, or even similar. Thus, if single-pass estimates are to be used to reduce work load and therefore increase the spatial distribution of sampling, which is a good thing in this case, then it would seem wise to validate these capture probabilities on a systematic or probabilistic design. Otherwise, a large amount of data will likely not stand the rigors of scientific review, and hence conclusions could be discounted by others. One practical point is that it appears that this deliverable currently requires only about 3% of the total funding for the project. Therefore, if the data to be generated are considered critical to the decisions made, then more funding and emphasis could be placed on generating estimates that can stand the rigor of review. E. Under Deliverable 2E, we wondered whether analysis of age from scales could underestimate true ages. If so, it seems wise to validate these ages for a subsample of fishes using otoliths. Again, conclusions should rest on data that have been validated. In high-altitude streams, cutthroat trout may not grow enough the first year to create an annulus, for example. Likewise, older fish may resorb edges of scales, making annuli difficult to distinguish, and also leading to underestimates. F. The Priority rankings in Table 6 are identical to the Management Sensitivity rankings, so it was unclear what new information is gained beyond this? Neither fish abundance nor wood abundance seems to influence priority. G. In Table 7, it was unclear on what estimator these abundance estimates are based, and what is the level of confidence for the interval? H. Is visibility sufficient to use snorkeling to determine whether WCT are using deep restored pools during summer? I. We agree that an important hypothesis to test is whether adfluvial CT life histories can resist BK invasion better than isolated resident ones. If the study can be designed to measure this, the results would be very important, and should be published. J. Along with the ideas being considered for control of brook trout, would it be cost effective to run several weirs to intercept moving brook trout, which tend to move as runoff is coming down, and for spawning (see Gowan and Fausch 1996 and Peterson and Fausch 2003, both in CJFAS)? K. As support for increasing the complexity and resiliency of habitats to ameliorate climate change, and the potential for brook trout to be influenced more strongly than WCT, see the new paper by Wenger et al. (2011; Proceedings National Academy of Sciences). These findings are reported there. 4a. Specific comments on protocols and methods described in MonitoringMethods.org: See comments above. 4a. Specific comments on protocols and methods described in MonitoringMethods.org: See comments above. Modified by Dal Marsters on 4/13/2012 12:31:33 PM. |
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Documentation Links: |
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Assessment Number: | 1990-044-00-NPCC-20090924 |
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Project: | 1990-044-00 - Coeur D'Alene Reservation Fisheries Habitat |
Review: | FY07-09 Solicitation Review |
Approved Date: | 10/23/2006 |
Recommendation: | Fund |
Comments: |
Assessment Number: | 1990-044-00-ISRP-20060831 |
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Project: | 1990-044-00 - Coeur D'Alene Reservation Fisheries Habitat |
Review: | FY07-09 Solicitation Review |
Completed Date: | 8/31/2006 |
Final Round ISRP Date: | None |
Final Round ISRP Rating: | Meets Scientific Review Criteria |
Final Round ISRP Comment: | |
Reviewers appreciate the focus, logic, and clarity provided by the response. That 15-page document showed evidence of a quality program with evidence of results, sound monitoring and a good potential for benefiting native resident fish. Upon reconsideration, although the original proposal had some deficiencies, the ISRP feels it should have given this a "response requested" in the initial review. In the current streamlined review process, with the absence of a site visit and verbal interactive presentations, it is more vital than ever that a proposal for an ongoing project adequately describe results and future plans. The original proposal for this project was extremely long (90+ pages), unfocused, and contained much semi-relevant material. When reviewers noted the absence of, for example, a description of how fish populations had changed over time, they reacted too critically. The trend and interannual abundance data provided in the response was nicely summarized and especially helpful.
As significantly clarified in this new material, the broad-based, long-term aquatic monitoring appears appropriate. There is clear utility of the monitoring to provide information for, for example, the land acquisition project 200204500 that apparently got much of its updated habitat and fish information from this project. Reviewers appreciate the new discussion of the ongoing brook trout removal program and agree with sponsors that both the no-action and the fish toxicant alternatives are not preferred. Reviewers did not favor the approach that seemed to be advocated in the original proposal of "piecemeal" electrofishing continued over a number of years. That method usually removes juveniles and gives survivors ample time to compensate, leading to no gain in suppression. However, as described in the response, the actual plan is for annual, single-pass electroshocking the entire upper Benewah Creek watershed just prior to brook trout spawning to target adult brook trout. Reviewers react more favorably to that approach provided that a substantial fraction (much more than half) of adults is removed each time to preclude a rapid brook trout rebound. The data provided in the response does not identify what fraction of the population of brook trout adults is removed annually. Reviewers are skeptical and note that the most recent recommendation from Montana researchers calls for at least six removal treatments of two to three electrofishing passes per treatment within two to three years, and for trampling brook trout redds. The ISRP would not view the possible outcome that such annual single-pass removal might be effective, but be needed to be continued indefinitely, as constituting "success." Reviewers suggest that by the conclusion of the 07-09 funding cycle the ability/inability of sponsors' protocol to suppress brook trout should be apparent. |
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Project Relationships: | None |
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Additional Relationships Explanation:
BPA 199206100 – Albeni Falls Wildlife Mitigation
The Coeur d’Alene Tribe’s Albeni Falls Wildlife Mitigation Project serves to mitigate for wildlife habitat losses attributed to the construction and inundation of Albeni Falls Dam. To date the Coeur d’Alene Tribe has credited 3,676 HUs against Albeni Falls Wildlife losses. One of the properties purchased by the Coeur d’Alene Tribe encompasses 411 acres in the Benewah Creek Watershed including nearly 3.2 miles of the upper mainstem of Benewah Creek and the lower portions of several spawning tributaries. The property includes critical rearing habitats for westslope cutthroat trout in the watershed and has been the focus of restoration and monitoring activities implemented under BPA project 199004400 since 2002. Restoration goals include recovery of geomorphological and ecological processes to improve the production potential for westslope cutthroat trout. Effectiveness monitoring of restoration activities will continue during this proposal to determine the specific linkages between restoration and habitat utilization, abundance and distribution of cutthroat trout as well as possible effects on growth and survival.
Additional properties may also be purchased during the course of this proposal where Albeni Falls mitigation priorities overlap with high priority areas identified by BPA project 199004400. In these areas, Project proponents will assess the fisheries restoration and enhancement needs, then design and implement appropriate restoration measures to maximize the habitat potential for target species.
Bonneville Environmental Foundation (BEF) – Benewah Creek Model Watershed Project.
The BEF board of directors established a 10-year funding partnership with the Coeur d’Alene Tribe beginning in 2005 to support restoration and monitoring in Benewah Creek, distinguishing Tribal efforts with their Model Watershed Project status. BEF has committed more than $100,000 during this time frame to fund the Coeur d’Alene Tribe Fisheries Program to strengthen watershed-scale monitoring in Benewah Creek by developing a robust effectiveness monitoring program to inform implementation of restoration actions. Qualifying for BEF Model Watershed funding required development of detailed monitoring objectives and benchmarks to facilitate tracking progress in meeting recovery goals in the watershed. The Model Watershed Project, in turn, has undergone an independent science review on several occasions, with BEF providing funding in addition to the grant award to facilitate the process. Grant monies have been used to establish a weather station and stream gage to collect continuous measurements of discharge, temperature, turbidity and TSS that supplement our collection of discrete data at sites along the longitudinal profile of Benewah Creek and tributaries. Data acquisition and analysis supports modeling of temperature effects on production of native westslope cutthroat trout, an important cultural and biological resource to the Coeur d’Alene Tribe.
Avista Corporation – Spokane River Hydroelectric Project
In 2009, the Federal Energy Regulatory Commision (FERC) issued a 50-year operating license to Avista for its Spokane River Hydroelectric Project, which includes the Post Falls HED in the Coeur d’Alene Subbasin. Under the provisions of the Federal Power Act, the hydroelectric license issued by FERC included mandatory conditions providing provisions for protecting and enhancing the Tribe’s natural and cultural resources and providing the Tribe with appropriate compensation for the Project’s use of its lands and waters. Specific license conditions for the Post Falls HED, pertinent to this BPA funded project, require the applicant to provide assistance and financial support for the follwoing:
1. To ensure protection of federally listed bull trout and its designated critical habitat, Avista is required to implement its proposed non-native predator fish removal program. The program will consist of a three-year study of bull trout predation by non-native fish in Coeur d’Alene Lake and the lower St. Joe River, and, if predation is documented, implement measures to reduce the potential for non-native fish predation on bull trout.
2. The license requires Avista to develop and implement a fishery protection and enhancement plan for native Westslope cutthroat trout and bull trout. The plan will include provisions for conducting fish population assessment and monitoring activities, and implementing enhancement actions and a fisheries public education and outreach program specific to Westslope cutthroat trout and bull trout in the Coeur d’Alene Lake basin.
3. The license requires Avista to develop and implement a Coeur d’Alene Indian Reservation wetland and riparian habitat plan and to restore or replace at least 1,368 acres of wetlands within or adjacent to the Coeur d’Alene Indian Reservation.
Implementation of these license conditions will provide direct cost share opportunities during the course of the 50-year license beginning in 2009. Where the priorities for meeting these license conditions intersect with objectives for BPA Project 199004400, Avista funding will directly contribute to meeting project benchmarks for improving habitats, through purchase, protection and restoration of wetlands, and in addressing in-lake survival of native salmonids through programs designed to reduce predation effects by non-native fishes.
Coeur d’Alene Tribe – TMDL Development and Implementation
The Coeur d’Alene Tribe Water Resource Program has received more than $1,000,000 in combined funding from EPA, the Bureau of Reclamation, and other sources since 2001 to collect water quality data, develop watershed assessments, and assist in the development of TMDL’s for the Lake, Benewah and Alder creek watersheds. This data has been useful in identifying limiting factors and prioritizing restoration treatments. Following the development of TMDL’s, the Water Resource Program will prepare implementation plans to achieve sediment reduction goals for each of the respective watersheds. These plans will be complementary to ongoing restoration activities provided by BPA Project 199004400 and will help provide cost shares for implementation in the future.
Coeur d’Alene Tribe – (NRDA) Restoration Activities and Superfund Implementation Oversight
In 1983, The US EPA listed the Bunker Hill Mining and Metallurgical Complex Site as a Superfund Site on the National Priorities List. This initiated what was to become a massive superfund cleanup in the Tribes’ homeland. Seeing that neither EPA nor the State of Idaho was fully addressing mining pollution, the Tribe initiated a Natural Resource Damage Assessment in 1991 with the objective of restoring the natural resources that were injured due to the release of hazardous waste from historical mining activities. In 1996, the Federal Trustees represented by the Dept. of Interior (USFWS and BLM) and Dept. of Agriculture (USFS) joined in the lawsuit. During this time significant scientific data were collected in preparation for NRD litigation. The natural resource injuries that were documented (and later acknowledged in District Court) included: surface water, ground water, riparian resources, benthic macro invertebrates, phytoplankton, fish, birds, soils, and sediments. The Tribe spent over a decade determining injury to natural resources and compiling information that will be invaluable in restoring, rehabilitating, replacing, and/or acquiring equivalent natural resources in the Coeur d’Alene Basin.
In 2007, the Tribe and Federal Trustees developed the Interim Restoration Plan which identified management alternatives to begin restoration. To date, some restoration of fisheries resources on Reservation streams has been implemented to replace lost habitat, and lost fisheries resources in the polluted Coeur d’Alene River system. In addition as of September 2011, the Tribe, State of Idaho, and Federal Trustees settled with the final potential responsible party in the basin (thus ending the 20 year court case) and have begun allocating settlement funds for the development of a Programmatic Environmental Impact Statement where basin-wide restoration activities will be identified. There were previous settlement funds that were allocated towards lake management activities and the restoration or replacement of riparian resources. Concurrent with restoration planning and implementation, EPA continues to implement their Record of Decision documents under Superfund. EPA superfund remedial actions are being coordinated through the Coeur d’Alene Basin Environmental Improvement Project Commission (the Basin Commission), a forum established through Idaho statute to provide local oversight of all EPA remedial actions. As a voting member of this 7 member Board, the Tribe has endorsed numerous studies and projects to address water quality issues and has sponsored projects which reduce nutrient loading to Coeur d'Alene Lake and the entire basin watershed. These projects have direct impact on the lake’s water quality, fisheries resources, and have provided a wealth of data with which to understand lake water quality dynamics. Coordination of BPA funded activities with the implementation of remedial actions conducted through the Basin Commission will have significant positive benefits in recovering Coeur d’Alene Subbasin cutthroat trout metapopulation dynamics.
Populations | Origin | # of PIT Tags per year | Type of PIT Tag | Years to be tagged | Comments |
Cutthroat Trout, Westslope (O. c. lewisi) | Wild | 2000 | HDX - Half Duplex | 2013 - 2017 | Juveniles tagged during the summer/fall in stream habitats, and those tagged during spring outmigration periods will be double-marked with an adipose clip to assess short and long term tag retention. Adult spawners that are intercepted by traps during their upriver migration will also be opercle-punched to serve as a temporary but recognizable mark during post-spawn recapture events. This double mark will serve to evaluate retention of PIT tags implanted into adult spawners. |
We intend to PIT tag approximately 250 fish annually during summer/fall periods per targeted tributary in each of our two adfluvial watersheds to generate tributary-specific survival rates. This sample size was based on survival and detection probabilities that were generated by studies that conducted mark-recapture experiments to examine in-stream survival rates of cutthroat trout (Budy et al. 2007; Berger and Greswell 2009) and bull trout (Al-Chokhachy and Budy 2008). We used estimates from these studies because we did not have any empirically-derived estimates in our watersheds. Moreover, these studies were examining phenomena (e.g., differences in survival rates of migratory versus resident variants) and using sampling methodologies (e.g., active and passive recaptures with PIT-tag antennas) that were analogous to our proposed project. The range of estimated survival and detection probabilities taken from these studies were 0.3-0.5 and 0.4-0.6, respectively. Given an initial release size of 250 fish, combinations of probabilities within these ranges were input into the program SampleSize v. 2.0.9 (University of Washington, Seattle WA) and precision levels generated for the survival parameter. Coefficients of variation for all simulated scenarios did not exceed 15%, and many were <10%. Based on this analysis, we considered a release size of 250 tagged fish to be a feasible target that would ensure a statistically valid level of precision within the constraints imposed by expected levels of sampling effort.
Name (Identifier) | Area Type | Source for Limiting Factor Information | |
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Type of Location | Count | ||
Black Lake-Coeur d'Alene River (170103030202) | HUC 6 | QHA (Qualitative Habitat Assessment) | 1 |
Lake Creek (170103030401) | HUC 6 | QHA (Qualitative Habitat Assessment) | 1 |
Coeur d'Alene Lake (170103030406) | HUC 6 | QHA (Qualitative Habitat Assessment) | 4 |
Alder Creek (170103041003) | HUC 6 | None | |
Benewah Creek (170103041102) | HUC 6 | QHA (Qualitative Habitat Assessment) | 1 |
Pedee Creek-St Joe River (170103041104) | HUC 6 | QHA (Qualitative Habitat Assessment) | 2 |
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Project Deliverables | How the project deliverables help meet this objective* |
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Stream wood additions (DELV-1A) | Implementation of stream wood additions as planned meets objective criteria C1: 70% of available habitat to meet CWD loading criteria of 6m3/100m and objective criteria H2: Increase the frequency of overbank flows (=1.5-2yr flood) in incised tributary/mainstem reaches. |
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Riparian management (DELV-1B) | Implementation of riparian management as planned meets objective criteria R1: 75% canopy cover in 2nd order tributaries; and R2: 70% of stream reaches with ability to meet interim instream wood loading criteria of 6m3/100m over 150 years. |
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Reduce sediment delivery from roads (DELV-1C) | Implementation of forest road projects as planned meets objective criteria S1: Reduce sediment delivery by 75% from hydrologically connected road segments; S2: Treat all culverts with high risk of failure; and H1: Reduce length of hydrologically connected road segments to achieve a criteria of less than 0.2 mi/sq. mi. at the sub-watershed scale; |
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Remove or Retrofit Fish Barriers (DELV-1D) | Implementation of fish passage projects as planned meets objective criteria C2: Treat all culverts blocking adult passage and other high/mod priority culverts on a case by case basis. |
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Project Deliverables | How the project deliverables help meet this objective* |
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Abundance of adfluvial cutthroat trout spawners (DELV-2A) | Adult abundance is a high priority high-level indicator that permits an evaluation of the status and trend of adfluvial westslope cutthroat trout in our monitored watersheds within the Basin. |
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Adfluvial cutthroat trout juvenile production (DELV-2B) | Obtaining estimates of outmigrating juvenile production will enable estimates of juveniles per spawner which is a high level indicator of the productivity of wild fish populations. Annual outmigrant production estimates will permit the evaluation of the trend in this high-level indicator over time. |
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In-lake survival rates of adfluvial cutthroat trout (DELV-2C) | Obtaining estimates of juvenile to first time spawner return rate for consecutive outmigrating juvenile cohorts and estimates of repeat spawner return rates for adults will allow us to track trends in in-lake survival of both juvenile and adult cutthroat trout. In-lake survival rates, notably for juveniles, may be the most influential vital rate in determining the productivity of adfluvial cutthroat trout and consequently is vital in understanding overall trends in population abundance. Similar rates have been defined as a high priority high level indicator for steelhead and salmon populations (i.e., SAR), and consequently we are considering juvenile to adult return rates in migratory cutthroat trout to be equally important. |
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Indices of cutthroat trout abundance in stream reaches (DELV-2D) | Obtaining annual estimates that index the abundance of cutthroat trout across stream reaches will allow us to track trends in the relative abundance and spatial distribution of populations in our target watersheds. |
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Growth rates of cutthroat trout (DELV-2E) | Examining changes in the growth rates of cutthroat trout during periods of stream and lake residence will allow us to track growth as an index of the productivity of adfluvial cutthroat trout populations in both types of rearing habitats within the Coeur d'Alene Basin. |
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Stream survival rates of cutthroat trout (DELV-2F) | Examining survival rates during stream residence will allow us to obtain a better understanding of population demographics of cutthroat trout throughout their life-cycle. Life-cycle mortality, which is an indicator of population productivity, is considered to be a high priority, high level indicator. |
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Movements among critical habitats as expression of life-history strategies in cutthroat trout (DELV-2G) | Examining the seasonal in-stream movements of cutthroat trout among critical rearing habitats will provide a better understanding of the connectivity of sub-populations within watersheds (i.e., population structure). Examining seasonal movements may also permit a better understanding of reaches used by trout as overwintering habitat, and how overwintering reaches (e.g., restored habitat in upper Benewah mainstem) may provide habitat that is critical for the overall productivity of cutthroat trout. Examining the contribution of various tributaries to adfluvial production will permit a better understanding of the diversity and structure of adfluvial populations within the Lake and Benewah watersheds. |
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Project Deliverables | How the project deliverables help meet this objective* |
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Habitat response to implemented restoration measures in sub-watersheds (DELV-3A) | This deliverable employs probabilistically distributed habitat surveys and modified BACI statistical designs to evaluate how riparian and in-stream channel improvements induce changes in physical habitat attributes (e.g., pool frequency and depth, riparian cover, large woody debris loadings, substrate size) that have been linked to the quality of salmonid habitat. Furthermore, our monitoring efforts intend to pair salmonid sampling/tagging efforts with habitat surveys at the reach scale in both treated and control sub-watersheds to inform linkages between changes in habitat conditions and responses in salmonid metrics (e.g., density). Therefore, this deliverable intends to evaluate the effectiveness of restoration measures in improving salmonid habitat, and, in combination with Deliverable 3C, intends to evaluate the effectiveness of restoration measures in eliciting responses in cutthroat trout. |
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Habitat response to restoration in mainstem/floodplain reaches in upper Benewah (DELV-3B) | Habitat attributes linked to the quality of cutthroat trout habitat (e.g., presence and persistence of deep pools) are monitored in the low-gradient, unconstrained floodplain reach in the upper Benewah mainstem. Tracking whether benchmark performace measures for these attributes are maintained or achieved over time post-restoration will allow us to evaluate the long-term success in the effectiveness of our mainstem restoration measures. Two of the primary objectives of the various treatments that have been applied in upper Benewah mainstem reaches are: (1) to improve connectivity between the channel and the adjacent floodplain to restore functional riparian processes; and (2) to provide more suitable rearing temperatures during critical periods for cutthroat trout. Long-term monitoring of groundwater levels in floodplain habitats as an indicator of connectivity and water storage should permit an evaluation of the effectiveness of these restoration measures. In reference to the second objective, we have documented the creation of thermal refugia in deep restored pools as a short-term response to the effectiveness of our restoration actions. Continued monitoring will allow us to track the persistence of the spatial extent and magnitude of these refugia under variable temperature and hydrological regimes to evaluate the long-term effectiveness of our restoration measures in achieving this objective. In a similar vein, long-term monitoring of ambient stream temperatures in restored mainstem reaches will allow us to evaluate the linkages between our restoration measures and changes in stream temperature. Our actions are expected to improve water storage in floodplain habitats and promote the recovery of riparian plant communities. In turn, water contributions from floodplain habitats during baseflow periods and increased canopy cover should decrease stream temperatures. |
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Biological response to implemented restoration measures in sub-watersheds (DELV-3C) | One of the objectives of habitat restoration is to increase the quality or suitability of rearing environments for cutthroat trout. Tracking trends in density indices at the localized reach scale and survival rates at the sub-watershed scale using a hierarchical treatment and control approach will permit an evaluation of whether cutthroat trout populations are responding to restoration measures implemented to improve the quality of rearing habitats during stream residence. As more reaches within treated sub-watersheds and as more sub-watersheds are incrementally restored, we should expect to see an increase in the outmigrant production of juvenile cutthroat trout within our adfluvial watersheds. Juvenile outmigrant production is thus another indicator of the effectiveness of habitat restoration at an aggregated larger spatial scale. The colonization of previously blocked unoccupied tributary reaches within a watershed is another indicator of the effectiveness of specific habitat actions that address and fix migratory barriers (e.g., impassable culverts). Examining the movements of cutthroat trout from tributary to restored mainstem reaches during overwintering periods, and the differential survival that may exist between those individuals that express this behavior and those that remain in tributaries throughout the winter could be another indicator of the effectiveness of habitat restoration in improving population productivity. |
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Project Deliverables | How the project deliverables help meet this objective* |
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Implementation and evaluation of measures to suppress brook trout (DELV-4A) | Realizing the documented negative impacts of non-native brook trout on cutthroat trout, suppression measures are implemented annually to control the abundance of brook trout in the upper Benewah watershed. Data are also collected to examine the numerical and reproductive compensatory response of brook trout to our removal efforts to evaluate the effectiveness of the suppression program. |
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Consumptive impact of northern pike and smallmouth bass on cutthroat trout (DELV-4B) | A study will be completed in 2013 that will provide estimates of the annual consumption of cutthroat trout by northern pike and smallmouth bass in Lake Coeur d'Alene. These estimates will permit a quantitative understanding of the impacts of both non-native predators on adfluvial cutthroat trout populations and will likely guide management efforts to address these impacts. |
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Implementation of measures to address impacts of non-native fish on in-lake survival of cutthroat trout (DELV-4C) | Contingent on the findings of the northern pike and smallmouth bass consumption study, various alternatives will be explored to be considered for implementation in Lake Coeur d'Alene to manage non-native fish assemblages that impact adfluvial cutthroat trout populations. |
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Project Deliverables | How the project deliverables help meet this objective* |
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Develop and Coordinate Natural Resources and STEM Education Programs (DELV-5A) | This deliverable helps meets the benchmark for education and outreach by involving more than 1000 students and teachers annually in natural resource and science, technology, engineering and math activities that are made available to the Reservation community. These programs are especially geared toward facilitating increased enrollment of Tribal members in natural resources management related degree programs at the post-secondary level. |
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Coordinate Community Education and Outreach Activities (DELV-5B) | This deliverable helps meets the benchmark for education and outreach by reaching more than 4000 people annually through distributing program related information and directly involving community members in events. |
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RM&E Protocol | Deliverable | Method Name and Citation |
Trap adfluvial adult westslope cutthroat trout in Lake and Benewah Creeks of CDA Basin v1.0 | ||
Stream habitat surveys to track changes in habitat characteristics due to restoration efforts v1.0 | ||
Stream and Air Temperature monitoring in project watersheds to track trends in temperature due to restoration v1.0 | ||
Groundwater monitoring in project watersheds to track changes due to restoration v1.0 | ||
Beaver dam surveys to evaluate the changes in beaver dam characteristics due to restoration v1.0 | ||
Sample salmonids in rearing habitats of target watersheds in the CDA Basin v1.0 | ||
EXPIRED: Stream surveys to evaluate productivity, movements, and life-history diversity of cutthroat trout in watersheds of the Coeur d'Alene Basin v1.0 | ||
A study of thermal heterogeneity of stream reaches to evalute changes due to restoration efforts v1.0 | ||
EXPIRED: Evaluating effectiveness of non-native brook trout suppression program in the Benewah watershed v1.0 |
Project Deliverable | Start | End | Budget |
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Stream wood additions (DELV-1A) | 2013 | 2017 | $1,235,734 |
Riparian management (DELV-1B) | 2013 | 2017 | $1,183,683 |
Reduce sediment delivery from roads (DELV-1C) | 2013 | 2017 | $905,877 |
Remove or Retrofit Fish Barriers (DELV-1D) | 2013 | 2017 | $1,211,778 |
Abundance of adfluvial cutthroat trout spawners (DELV-2A) | 2013 | 2017 | $293,787 |
Adfluvial cutthroat trout juvenile production (DELV-2B) | 2013 | 2017 | $293,787 |
In-lake survival rates of adfluvial cutthroat trout (DELV-2C) | 2013 | 2017 | $110,306 |
Indices of cutthroat trout abundance in stream reaches (DELV-2D) | 2013 | 2017 | $277,720 |
Growth rates of cutthroat trout (DELV-2E) | 2013 | 2017 | $116,641 |
Stream survival rates of cutthroat trout (DELV-2F) | 2013 | 2017 | $499,703 |
Movements among critical habitats as expression of life-history strategies in cutthroat trout (DELV-2G) | 2013 | 2017 | $419,585 |
Habitat response to implemented restoration measures in sub-watersheds (DELV-3A) | 2013 | 2017 | $381,204 |
Habitat response to restoration in mainstem/floodplain reaches in upper Benewah (DELV-3B) | 2013 | 2017 | $315,795 |
Biological response to implemented restoration measures in sub-watersheds (DELV-3C) | 2013 | 2017 | $227,181 |
Implementation and evaluation of measures to suppress brook trout (DELV-4A) | 2013 | 2017 | $223,594 |
Consumptive impact of northern pike and smallmouth bass on cutthroat trout (DELV-4B) | 2013 | 2013 | $52,564 |
Implementation of measures to address impacts of non-native fish on in-lake survival of cutthroat trout (DELV-4C) | 2014 | 2017 | $692,224 |
Develop and Coordinate Natural Resources and STEM Education Programs (DELV-5A) | 2013 | 2017 | $805,557 |
Coordinate Community Education and Outreach Activities (DELV-5B) | 2013 | 2017 | $604,558 |
Unassigned Work Elements from Locations (UAWE) | 2012 | 2012 | $0 |
Total | $9,851,278 |
Fiscal Year | Proposal Budget Limit | Actual Request | Explanation of amount above FY2012 |
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2013 | $1,775,697 | The requested FY 2013 budget is greater than the BPA expected budget of FY2012 + 0.90% inflation. These differences are accounted for in part by the addition of 0.5 FTE needed to complete M&amp;E work associated with proposed effectiveness monitoring, as well as necessary predator management efforts in Coeur d'Alene Lake that are not part of the current scope of work. The annual increase in expected personnel costs also generally exceeds the stated rate of inflation (0.90%). | |
2014 | $1,964,476 | FY2014 budget request increases $217,550 over FY2013, primarily to accomodate the expected costs of negotiating conservation easements associated with implementing proposed riparian management prescriptions to benefit stream habitats. | |
2015 | $2,000,164 | ||
2016 | $2,054,461 | ||
2017 | $2,056,480 | ||
Total | $0 | $9,851,278 |
Item | Notes | FY 2013 | FY 2014 | FY 2015 | FY 2016 | FY 2017 |
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Personnel | $978,024 | $1,030,576 | $1,064,996 | $1,117,762 | $1,117,762 | |
Travel | $0 | $0 | $0 | $0 | $0 | |
Prof. Meetings & Training | $19,396 | $19,396 | $19,396 | $19,396 | $19,396 | |
Vehicles | $47,565 | $49,944 | $49,944 | $52,321 | $52,321 | |
Facilities/Equipment | (See explanation below) | $86,565 | $44,248 | $38,033 | $29,332 | $29,332 |
Rent/Utilities | $14,530 | $15,257 | $15,257 | $15,983 | $15,983 | |
Capital Equipment | $8,700 | $0 | $8,700 | $0 | $0 | |
Overhead/Indirect | Calculated at 25% | $335,696 | $342,276 | $347,674 | $360,273 | $360,677 |
Other | Includes supplies and subcontracts | $285,221 | $462,779 | $456,164 | $459,394 | $461,009 |
PIT Tags | $0 | $0 | $0 | $0 | $0 | |
Total | $1,775,697 | $1,964,476 | $2,000,164 | $2,054,461 | $2,056,480 |
Assessment Number: | 1990-044-00-ISRP-20120215 |
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Project: | 1990-044-00 - Coeur D'Alene Reservation Fisheries Habitat |
Review: | Resident Fish, Regional Coordination, and Data Management Category Review |
Proposal Number: | RESCAT-1990-044-00 |
Completed Date: | 4/13/2012 |
Final Round ISRP Date: | 4/3/2012 |
Final Round ISRP Rating: | Meets Scientific Review Criteria |
Final Round ISRP Comment: | |
First Round ISRP Date: | 2/8/2012 |
First Round ISRP Rating: | Meets Scientific Review Criteria |
First Round ISRP Comment: | |
This proposal is truly transformational from previous work by the Coeur d’Alene Tribe. They are taking the approach that subbasin planning envisioned. This is good solid work that needs to be published; some of the principal investigators have a record of this. The CDA Fisheries project is a model for an approach for the problem. Additional sampling work may allow investigators to find out some important aspects of native trout life histories. Some telemetry work will be informative. The ISRP compliments Angelo Vitale and John Firehammer for the clear presentations and for their efforts to combine wildlife and fisheries activities, in Benewah Creek as well as in the Hangman watershed. Overall, this proposal represents excellent planning, analysis, synthesis, and progress toward the goal of restoring adfluvial westslope cutthroat trout to CDA Lake and its tributaries. The factors affecting these fish are many, ranging from large-scale landscape-level habitat processes to non-native species invasions. The investigators have done a very good job of studying each of these, or developing plans to do so, and integrating and prioritizing restoration actions to optimize management. Likewise, the outreach and education activities planned are helping local landowners understand and support the projects. Several aspects of the analysis of cutthroat trout survival and production might be improved by using state-of-the-art methods and software (Program MARK), if these are not already planned. Likewise, further consideration of brook trout invasions at a riverscape scale could yield important insights in their control. The proposal was very long (61 pages), which detracted from the review; however, many of the project findings were summarized in the proposal which is good. A number of appropriate metrics are being collected along with the habitat restoration effort, for example, adfluvial juveniles per spawner and juvenile-to-spawner survival rates. The ultimate success of the program for adfluvial trout may hinge on the ability to identify and control factors limiting survival from the juvenile-to-adult stage, such as predation by non-native fishes. The overall annual cost of the project is high relative to the eventual native fish population size, but the project is diverse with many activities and areas of focus. 1. Purpose: Significance to Regional Programs, Technical Background, and Objectives This is an ongoing project designed to address the highest priority objective in the Coeur d’Alene Subbasin: to protect and restore remaining stocks of native resident westslope cutthroat trout (Oncorhynchus clarki lewisi) to ensure their continued existence in the basin and provide harvestable surpluses of naturally reproducing adfluvial adult fish in Lake Coeur d’Alene and in Lake and Benewah creeks, with stable or increasing population trends for resident life history types in Evans and Alder creeks. This is a well-designed and well-presented proposal that systematically documents linkages to regional planning documents such as the Coeur d’Alene Subbasin Plan, past ISAB and ISRP reviews and guiding documents, and to regional strategies for recovering tributary habitats. The investigators provide excellent and detailed information about how their project relates to the Fish and Wildlife Program, and seven other programs in the Columbia River Basin. The work is clearly well integrated with current plans. Technical background in the proposal is thorough and systematic, leading logically to the proposed and ongoing objectives and actions. The proposal clearly states that the main goal is to increase production and survival of adfluvial and resident westslope cutthroat trout (WCT) to make up for lost production of anadromous salmonids. The technical background needed to understand the myriad factors that affect these WCT is almost always very well detailed. Some earlier proposals focused on using artificial production to increase westslope cutthroat trout in Benewah Creek and in Lake Coeur d’Alene without adequately considering and attempting to address limiting factors. In contrast, this proposal describes known and potential factors that appear to be inhibiting cutthroat trout production. These include sediment input from past land use practices along Benewah Creek, lack of coarse woody debris, barriers to fish movement and migrations, and competition with non-native brook trout. Strategies, objectives, and actions flow logically from this discussion and analysis. The five stated main objectives appear sound, clear, and measurable, though several will be very challenging to accomplish because of the spatial scale over which WCT complete their life cycle in this stream-lake ecosystem. Objectives include improving stream habitat, reconnecting old floodplain meadow sections, evaluation of habitat restoration actions, and reduce brook trout abundance and densities. Objectives seem well matched to the discussion of limiting factors in the proposal. The project objectives are tiered to the Intermountain Province Objectives 2A1-2A4 and to the Columbia River Basin Goal 2A that addresses resident fish substitution for anadromous fish losses (Intermountain Province Subbasin Plan 2004). Project objectives are: 1) improve stream habitats; 2) track trends in salmonid demographics and population structure; 3) evaluate effectiveness of habitat restoration; 4) address impacts from non-native introduced fishes; and 5) increase cooperation and coordination among stakeholders. Several emerging limiting factors, such as predation by non-native fishes, are objectives of the proposal. Other project objectives, such as increasing habitat complexity and connectivity, are well integrated to help ameliorate the impending changes in climate variability. No formal modeling was done, however, and would likely be premature. The proposal also includes objectives for understanding the lacustrine portion of the adfluvial westslope cutthroat trout life history and the impact that non-native northern pike may be having on the survival of WSCT, particularly during their first year outmigration into the shallow southern littoral zone of Lake CDA where northern pike are abundant. This portion of the proposal seems the least well developed at this time; however, the approach and proposed actions are again, logical and deserving of investigation. 2. History: Accomplishments, Results, and Adaptive Management (ISRP Review of Results) History: The CDA approach to management of Benewah Creek and its cutthroat trout has evolved over time and now appears to be solidly grounded in modern ecological and restoration science. A fundamental goal of the Coeur d’Alene Tribe Fisheries Program is to identify restoration and enhancement needs and opportunities in areas that have the greatest potential to improve habitat and translate into positive biological responses to recover depressed native cutthroat trout populations. The approach attempts to translate watershed analyses, resource inventories and assessments and monitoring results into the management actions needed to achieve project goals. The recent project history reflects a shift from opportunistic implementation of restoration projects to a more systematic approach for prioritizing management actions consistent with the refugia approach described by Reeves et al (1995) and Frissell and Bayles (1996) and a multispecies, analytical approach (Beechie and Bolton 1999). The approach attempts to protect the best first and expand restoration outward from areas of relatively intact habitats and populations. The multispecies analytical approach has been implemented as more detailed knowledge of factors limiting recovery have been developed. Actions focus on suites of landscape processes considered necessary to conserve multiple species. Accomplishments: The ISRP was impressed by the careful formal planning and prioritization of restoration developed in this proposal. The investigators take a highly integrated approach to understand the historical habitat conditions, and ecosystem disturbances and processes that create and sustain habitat for WCT in this basin. They integrate knowledge of ecohydrology and channel-floodplain-riparian vegetation linkages in their work, which is uncommon. From this, they develop goals for instream habitat restoration that are in line with these natural processes, such as encouraging "ecosystem engineering" by beavers to create suitable habitat for WCT. All of this is a result of accomplishments in past data collection, analysis, and further research and synthesis based on these results, which appears to have been very well done, overall. Second, it appears that the investigators have fairly recently realized that they will need a comprehensive mark-recapture program using PIT tags to develop robust estimates of production and survival of WCT by life stage, in order to understand which suite of factors are limiting their numbers and vital rates, and where in the river-lake system these bottlenecks occur. As such, we wondered whether employing a sophisticated tool like Program MARK would be most useful (see website of Dr. Gary White, Colorado State University), which can be used to estimate capture probabilities, abundance, survival, movement, and parameters like temporary emigration of fish using state-of-the-art analysis and testing methods. Third, we were impressed with the approach the investigators are using to consider effects of non-native species at riverscape and lakescape scales. Clearly, like WCT, brook trout in streams also will use habitat in a spatially dynamic way, as will northern pike and smallmouth bass in CDA Lake. Understanding these dynamics may allow intercepting the non-native fish using traps or other gear at key locations where they spawn, or past which they move, leading to more cost-effective control methods in this situation where complete removal is likely impossible. Results: This section features a nicely described logical sequence from restoration objectives (Table 1), moving through prioritizations (Table 2), into watershed functions and processes, which are tied to specific assessment techniques and procedures (Table 3). Tables 4 and 5 work through site-specific restoration actions and priorities. This is a very nice and defensible approach. For example, since 2004, 6.8 km of habitats have been made accessible through removal of passage barriers, 457 m of stream habitats have been treated with additions of coarse wood, and 6.2 km of degraded mainstem and tributary habitats and 20.3 hectares of associated floodplain have been treated through large-scale channel restoration. Although we have yet to see direct evidence of a significant response by cutthroat trout, we observed more pronounced positive trajectories in abundance in tributaries of Benewah Creek compared to the watersheds that have received less management intervention in recent years. Investigators are working to understand the entire life history of adfluvial westslope cutthroat trout in Benewah and Lake creeks. Given that recent PIT-tag data suggest that adfluvial juvenile-to-spawner return rates are exceptionally low in their monitored systems, they are placing a stronger emphasis on understanding the processes and mechanisms that are impacting the suitability of rearing habitats in Lake Coeur d’Alene. As an initial step toward this management goal, a collaborative study with the University of Idaho is currently underway to better understand whether predation by northern pike and smallmouth bass is a predominant mechanism regulating juvenile in-lake survival rates. It would be good to know what percentage of available degraded versus adequate habitat has been addressed by these activities since 2004, as a means to evaluate how far the effort has progressed. The collection of recruits per spawner (R/S) data and the change in objectives based on the low survival of juvenile to adult stage is good. The proposal has embraced the ISAB recommendation to use an Intensive Watershed Management approach, which involves use of treatment control sites to better identify factors affecting the resident fish. Adaptive Management: This project is well conceived and appears well executed. It is rich in data slides and tables, which demonstrate results from the last 7 years that feed directly into the adaptive management section. The changes made in light of new information were clearly described, including 1) developing a new understanding about how stream-riparian habitat is formed and inundated during floods, 2) adjusting removal strategies for non-native brook trout to account for their patchy distribution and vulnerability in spawning habitat, and 3) developing a new study to address potential for non-native fishes in Lake CDA to be an important limiting factor. The proposal and study are grounded in fisheries, conservation, and stream restoration literature and emphasizes data collection through monitoring in order to evaluate progress and modify, if needed, project goals and actions. This is the essence of adaptive management. Response to past ISRP and Council comments and recommendations: The authors have apparently responded to a main comment about the potential for non-native fishes in CDA Lake to reduce WCT survival. The goal of testing these effects, in part through a graduate student project, and the actions proposed based on these findings including developing new hypotheses, were clearly laid out and logical. The authors have also paid close attention to ISRP and ISAB studies and recommendations about habitat restoration, landscape and watershed scale activities, and the role of monitoring in adaptive management as evidenced by the proposal itself. ISRP Retrospective Evaluation of Results The CDA approach to management of Benewah Creek and its cutthroat trout has evolved over time and now appears to be solidly grounded in modern ecological and restoration science. The CDA Fisheries Habitat Project has considerable monitoring, evaluation and reporting associated with it. Results show progress toward overall project goals. The system in place also sets the stage well for the use of adaptive management. A fundamental goal of the Coeur d’Alene Tribe Fisheries Program is to identify restoration and enhancement needs and opportunities in areas that have the greatest potential to improve habitat and translate into positive biological responses to recover depressed native cutthroat trout populations. The approach attempts to translate watershed analyses, resource inventories and assessments and monitoring results into the management actions needed to achieve project goals. The recent project history reflects a shift from opportunistic implementation of restoration projects to a more systematic approach for prioritizing management actions consistent with a refugia approach and a multispecies, analytical approach. The approach first protects the best then expands restoration outward into other habitats and populations. Actions are focused on suites of landscape processes considered necessary to conserve multiple species. The project shows evidence of careful formal planning and prioritization of restoration activities using an integrated approach to understand the historical habitat conditions, and ecosystem disturbances and processes that create and sustain habitat for WCT in this basin. All of this is a result of accomplishments in past data collection, analysis, and further research and synthesis based on these results, which appears to have been very well done, overall. 3. Project Relationships, Emerging Limiting Factors, and Tailored Questions for Type of Work (hatchery, RME, tagging) Very well done, as described above. The Additional Relationships described in the proposal show that this project is well integrated into other mitigation and watershed projects, leading to synergistic and "value added" effects of coordination among projects. With respect to limiting factors, the sponsors recognize the importance of the low survival of the adfluvial juvenile to adult stage and are attempting to identify factors such as predation in the lake. Predation may constrain population increase. 4. Deliverables, Work Elements, Metrics, and Methods Deliverable Description: The deliverables were clearly laid out, overall. Those most clear were for 1) Habitat restoration, 3A&B) Responses to habitat restoration, 4) Non-native species control, and 5) Community outreach and education. The deliverables associated with 2) Abundance and production of WCT were less clear in some cases and might be expanded or considered further as outlined below. The project's recent (2005-present) deliverable status has an average completion rate of 94% (170 of 180 deliverables). Incomplete deliverables have generally been carried forward into subsequent contracts and have been completed in nearly all instances. Study Design: The study design was quite comprehensive, sophisticated, and well planned overall. We were very impressed with how well integrated the many components were. Specific points to consider that might improve the study results are: A. As described above, estimates of spawner abundance, juvenile production, survival in the lake, juvenile abundance, survival rates in streams, and movements among habitat types might be more fully integrated using a design that could be analyzed in Program MARK as one large integrated analysis. In fact, data from two systems (Benewah Creek and Lake Creek) might be analyzed together, even if processes differ between them, and allow data to be "shared" across systems, increasing power to detect important effects (see Saunders et al. 2011 NAJFM for such an analysis of stream trout abundance estimates). B. We were unclear about whether rainbow trout are native in this watershed, and if not, what the status of rainbow trout invasion is. Could climate change potentially trigger new invasions? Work by Clint Muhlfeld in Glacier National Park seems to be showing the potential danger of such invasions, and how management might be used to reduce them. C. Untreated controls are very useful, but it is not clear that they were selected at random. This is very difficult in such a large-scale study. However, one should describe how they were selected, how potential bias was reduced, and acknowledge that the comparison is useful but not a true treatment-control comparison. Several books like those by Brian Manly may help couch these comparisons in appropriate terms. D. We had some concerns about the use of single-pass electrofishing to estimate CPUE across stream sites. The deliverable is: DELV-2D: Indices of cutthroat trout abundance in stream reaches: Indices of cutthroat trout abundance in tributary and mainstem habitats in Lake, Benewah, Alder, and Evans creek watersheds will be annually computed employing single pass electroshocking at established 200 ft index sites. These annually computed indices will be used to track trends in cutthroat trout abundance at various spatial scales within watersheds, and to evaluate changes in the spatial distribution of cutthroat trout within mainstem and tributary reaches. The authors justify the use of single-pass sampling based on a high correlation between the number of WCT captured on the first pass and the number of marked fish released the previous day after one-pass sampling. They state that the number estimated the second day from multiple-pass sampling underestimated the "true abundance" of marked fish released, and that this is likely due to biases inherent in depletion sampling described in two papers (Peterson et al. 2004; Rosenberger and Dunham 2005). Given that no block nets were used to enclose the marked fish, might the lower number estimated the second day be at least partly due to emigration of marked fish after their release the first day? Saunders et al. (2011, NAJFM) showed that depletion estimates can be accurate, based on a similar study design using fences, and a more complete analysis. More importantly, the use of single-pass estimates as CPUE rests on the critical assumption that capture probabilities are equal across sites, years, and different crews, which may not be strictly true, or even similar. Thus, if single-pass estimates are to be used to reduce work load and therefore increase the spatial distribution of sampling, which is a good thing in this case, then it would seem wise to validate these capture probabilities on a systematic or probabilistic design. Otherwise, a large amount of data will likely not stand the rigors of scientific review, and hence conclusions could be discounted by others. One practical point is that it appears that this deliverable currently requires only about 3% of the total funding for the project. Therefore, if the data to be generated are considered critical to the decisions made, then more funding and emphasis could be placed on generating estimates that can stand the rigor of review. E. Under Deliverable 2E, we wondered whether analysis of age from scales could underestimate true ages. If so, it seems wise to validate these ages for a subsample of fishes using otoliths. Again, conclusions should rest on data that have been validated. In high-altitude streams, cutthroat trout may not grow enough the first year to create an annulus, for example. Likewise, older fish may resorb edges of scales, making annuli difficult to distinguish, and also leading to underestimates. F. The Priority rankings in Table 6 are identical to the Management Sensitivity rankings, so it was unclear what new information is gained beyond this? Neither fish abundance nor wood abundance seems to influence priority. G. In Table 7, it was unclear on what estimator these abundance estimates are based, and what is the level of confidence for the interval? H. Is visibility sufficient to use snorkeling to determine whether WCT are using deep restored pools during summer? I. We agree that an important hypothesis to test is whether adfluvial CT life histories can resist BK invasion better than isolated resident ones. If the study can be designed to measure this, the results would be very important, and should be published. J. Along with the ideas being considered for control of brook trout, would it be cost effective to run several weirs to intercept moving brook trout, which tend to move as runoff is coming down, and for spawning (see Gowan and Fausch 1996 and Peterson and Fausch 2003, both in CJFAS)? K. As support for increasing the complexity and resiliency of habitats to ameliorate climate change, and the potential for brook trout to be influenced more strongly than WCT, see the new paper by Wenger et al. (2011; Proceedings National Academy of Sciences). These findings are reported there. 4a. Specific comments on protocols and methods described in MonitoringMethods.org: See comments above. 4a. Specific comments on protocols and methods described in MonitoringMethods.org: See comments above. Modified by Dal Marsters on 4/13/2012 12:31:33 PM. |
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